Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01780 and ABZR86_RS01785 are separated by 112 nucleotides ABZR86_RS01785 and ABZR86_RS01790 are separated by 111 nucleotides ABZR86_RS01790 and ABZR86_RS01795 are separated by 2 nucleotides
ABZR86_RS01780: ABZR86_RS01780 - helix-turn-helix domain-containing protein, at 385,697 to 386,659
_RS01780
ABZR86_RS01785: ABZR86_RS01785 - cysteine hydrolase family protein, at 386,772 to 387,416
_RS01785
ABZR86_RS01790: ABZR86_RS01790 - leucyl/phenylalanyl-tRNA--protein transferase, at 387,528 to 388,262
_RS01790
ABZR86_RS01795: ABZR86_RS01795 - GNAT family N-acetyltransferase, at 388,265 to 389,449
_RS01795
Position (kb) 387
388
389 Strain fitness (log2 ratio) -2
-1
0
1
2 at 386.826 kb on + strand at 386.826 kb on + strand at 386.827 kb on - strand at 387.123 kb on + strand, within ABZR86_RS01785 at 387.123 kb on + strand, within ABZR86_RS01785 at 387.123 kb on + strand, within ABZR86_RS01785 at 387.124 kb on - strand, within ABZR86_RS01785 at 387.219 kb on + strand, within ABZR86_RS01785 at 387.375 kb on + strand at 387.376 kb on - strand at 387.420 kb on + strand at 387.420 kb on + strand at 387.421 kb on - strand at 387.421 kb on - strand at 387.421 kb on - strand at 387.521 kb on + strand at 387.521 kb on + strand at 387.647 kb on - strand, within ABZR86_RS01790 at 387.706 kb on + strand, within ABZR86_RS01790 at 387.817 kb on + strand, within ABZR86_RS01790 at 387.818 kb on - strand, within ABZR86_RS01790 at 387.818 kb on - strand, within ABZR86_RS01790 at 387.818 kb on - strand, within ABZR86_RS01790 at 387.890 kb on + strand, within ABZR86_RS01790 at 387.890 kb on + strand, within ABZR86_RS01790 at 387.891 kb on - strand, within ABZR86_RS01790 at 387.891 kb on - strand, within ABZR86_RS01790 at 387.892 kb on + strand, within ABZR86_RS01790 at 387.892 kb on + strand, within ABZR86_RS01790 at 387.892 kb on + strand, within ABZR86_RS01790 at 387.892 kb on + strand, within ABZR86_RS01790 at 387.892 kb on + strand, within ABZR86_RS01790 at 387.892 kb on + strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 387.893 kb on - strand, within ABZR86_RS01790 at 388.059 kb on + strand, within ABZR86_RS01790 at 388.059 kb on + strand, within ABZR86_RS01790 at 388.059 kb on + strand, within ABZR86_RS01790 at 388.060 kb on - strand, within ABZR86_RS01790 at 388.060 kb on - strand, within ABZR86_RS01790 at 388.060 kb on - strand, within ABZR86_RS01790 at 388.108 kb on + strand, within ABZR86_RS01790 at 388.108 kb on + strand, within ABZR86_RS01790 at 388.109 kb on - strand, within ABZR86_RS01790 at 388.132 kb on + strand, within ABZR86_RS01790 at 388.132 kb on + strand, within ABZR86_RS01790 at 388.315 kb on - strand at 388.387 kb on - strand, within ABZR86_RS01795 at 388.387 kb on - strand, within ABZR86_RS01795 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.484 kb on - strand, within ABZR86_RS01795 at 388.484 kb on - strand, within ABZR86_RS01795 at 388.484 kb on - strand, within ABZR86_RS01795 at 388.500 kb on + strand, within ABZR86_RS01795 at 388.501 kb on - strand, within ABZR86_RS01795 at 388.503 kb on + strand, within ABZR86_RS01795 at 388.504 kb on - strand, within ABZR86_RS01795 at 388.504 kb on - strand, within ABZR86_RS01795 at 388.560 kb on + strand, within ABZR86_RS01795 at 388.561 kb on - strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.723 kb on - strand, within ABZR86_RS01795 at 388.723 kb on - strand, within ABZR86_RS01795 at 388.723 kb on - strand, within ABZR86_RS01795 at 388.878 kb on + strand, within ABZR86_RS01795 at 389.092 kb on - strand, within ABZR86_RS01795 at 389.118 kb on + strand, within ABZR86_RS01795 at 389.118 kb on + strand, within ABZR86_RS01795 at 389.119 kb on - strand, within ABZR86_RS01795 at 389.119 kb on - strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.122 kb on - strand, within ABZR86_RS01795 at 389.122 kb on - strand, within ABZR86_RS01795 at 389.122 kb on - strand, within ABZR86_RS01795 at 389.200 kb on - strand, within ABZR86_RS01795 at 389.235 kb on + strand, within ABZR86_RS01795
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 386,826 + +0.0 386,826 + +0.4 386,827 - -0.1 387,123 + ABZR86_RS01785 0.54 -0.1 387,123 + ABZR86_RS01785 0.54 +1.3 387,123 + ABZR86_RS01785 0.54 -0.9 387,124 - ABZR86_RS01785 0.55 -0.1 387,219 + ABZR86_RS01785 0.69 -0.6 387,375 + +1.0 387,376 - -0.3 387,420 + +0.3 387,420 + +0.6 387,421 - +0.6 387,421 - +0.0 387,421 - -0.3 387,521 + +1.0 387,521 + -0.7 387,647 - ABZR86_RS01790 0.16 -0.6 387,706 + ABZR86_RS01790 0.24 +0.6 387,817 + ABZR86_RS01790 0.39 +0.1 387,818 - ABZR86_RS01790 0.39 -0.1 387,818 - ABZR86_RS01790 0.39 -0.2 387,818 - ABZR86_RS01790 0.39 -0.1 387,890 + ABZR86_RS01790 0.49 +0.2 387,890 + ABZR86_RS01790 0.49 -1.1 387,891 - ABZR86_RS01790 0.49 -2.0 387,891 - ABZR86_RS01790 0.49 -0.2 387,892 + ABZR86_RS01790 0.50 -0.5 387,892 + ABZR86_RS01790 0.50 +0.5 387,892 + ABZR86_RS01790 0.50 -1.1 387,892 + ABZR86_RS01790 0.50 -0.3 387,892 + ABZR86_RS01790 0.50 +0.4 387,892 + ABZR86_RS01790 0.50 +0.6 387,893 - ABZR86_RS01790 0.50 +0.0 387,893 - ABZR86_RS01790 0.50 +0.1 387,893 - ABZR86_RS01790 0.50 +1.0 387,893 - ABZR86_RS01790 0.50 -0.0 387,893 - ABZR86_RS01790 0.50 +0.2 387,893 - ABZR86_RS01790 0.50 +2.3 387,893 - ABZR86_RS01790 0.50 +0.5 387,893 - ABZR86_RS01790 0.50 +0.5 388,059 + ABZR86_RS01790 0.72 +0.1 388,059 + ABZR86_RS01790 0.72 -0.1 388,059 + ABZR86_RS01790 0.72 +0.1 388,060 - ABZR86_RS01790 0.72 +0.5 388,060 - ABZR86_RS01790 0.72 -0.1 388,060 - ABZR86_RS01790 0.72 +0.1 388,108 + ABZR86_RS01790 0.79 -0.5 388,108 + ABZR86_RS01790 0.79 -1.0 388,109 - ABZR86_RS01790 0.79 +0.4 388,132 + ABZR86_RS01790 0.82 -0.2 388,132 + ABZR86_RS01790 0.82 -0.6 388,315 - -0.2 388,387 - ABZR86_RS01795 0.10 +0.9 388,387 - ABZR86_RS01795 0.10 -0.5 388,483 + ABZR86_RS01795 0.18 -0.5 388,483 + ABZR86_RS01795 0.18 +0.1 388,483 + ABZR86_RS01795 0.18 +0.4 388,483 + ABZR86_RS01795 0.18 +0.1 388,484 - ABZR86_RS01795 0.18 +0.8 388,484 - ABZR86_RS01795 0.18 -0.5 388,484 - ABZR86_RS01795 0.18 -0.3 388,500 + ABZR86_RS01795 0.20 -0.3 388,501 - ABZR86_RS01795 0.20 +0.8 388,503 + ABZR86_RS01795 0.20 -0.3 388,504 - ABZR86_RS01795 0.20 -0.1 388,504 - ABZR86_RS01795 0.20 -0.5 388,560 + ABZR86_RS01795 0.25 +1.9 388,561 - ABZR86_RS01795 0.25 -0.6 388,722 + ABZR86_RS01795 0.39 -1.0 388,722 + ABZR86_RS01795 0.39 -0.0 388,722 + ABZR86_RS01795 0.39 +1.2 388,722 + ABZR86_RS01795 0.39 +0.0 388,723 - ABZR86_RS01795 0.39 -0.5 388,723 - ABZR86_RS01795 0.39 -0.1 388,723 - ABZR86_RS01795 0.39 +0.5 388,878 + ABZR86_RS01795 0.52 +0.0 389,092 - ABZR86_RS01795 0.70 +1.0 389,118 + ABZR86_RS01795 0.72 +0.8 389,118 + ABZR86_RS01795 0.72 +0.1 389,119 - ABZR86_RS01795 0.72 -0.6 389,119 - ABZR86_RS01795 0.72 -0.3 389,121 + ABZR86_RS01795 0.72 -0.3 389,121 + ABZR86_RS01795 0.72 -0.3 389,121 + ABZR86_RS01795 0.72 +1.1 389,121 + ABZR86_RS01795 0.72 -0.1 389,122 - ABZR86_RS01795 0.72 +0.3 389,122 - ABZR86_RS01795 0.72 -0.5 389,122 - ABZR86_RS01795 0.72 +1.0 389,200 - ABZR86_RS01795 0.79 -1.7 389,235 + ABZR86_RS01795 0.82 -0.4
Or see this region's nucleotide sequence