Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00565 and ABZR86_RS00570 are separated by 213 nucleotides ABZR86_RS00570 and ABZR86_RS00575 are separated by 175 nucleotides
ABZR86_RS00565: ABZR86_RS00565 - ThiF family adenylyltransferase, at 106,700 to 107,497
_RS00565
ABZR86_RS00570: ABZR86_RS00570 - acetoacetyl-CoA reductase, at 107,711 to 108,451
_RS00570
ABZR86_RS00575: ABZR86_RS00575 - tRNA glutamyl-Q(34) synthetase GluQRS, at 108,627 to 109,493
_RS00575
Position (kb)
107
108
109 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 106.935 kb on - strand, within ABZR86_RS00565 at 107.057 kb on + strand, within ABZR86_RS00565 at 107.285 kb on + strand, within ABZR86_RS00565 at 107.306 kb on + strand, within ABZR86_RS00565 at 107.306 kb on + strand, within ABZR86_RS00565 at 107.307 kb on - strand, within ABZR86_RS00565 at 107.307 kb on - strand, within ABZR86_RS00565 at 107.307 kb on - strand, within ABZR86_RS00565 at 107.307 kb on - strand, within ABZR86_RS00565 at 107.307 kb on - strand, within ABZR86_RS00565 at 107.502 kb on + strand at 107.503 kb on - strand at 107.633 kb on + strand at 107.634 kb on - strand at 107.669 kb on + strand at 107.670 kb on - strand at 107.670 kb on - strand at 107.670 kb on - strand at 107.712 kb on + strand at 107.712 kb on + strand at 107.712 kb on + strand at 107.712 kb on + strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.997 kb on + strand, within ABZR86_RS00570 at 108.013 kb on - strand, within ABZR86_RS00570 at 108.150 kb on + strand, within ABZR86_RS00570 at 108.151 kb on - strand, within ABZR86_RS00570 at 108.151 kb on - strand, within ABZR86_RS00570 at 108.352 kb on - strand, within ABZR86_RS00570 at 108.388 kb on - strand at 108.457 kb on + strand at 108.457 kb on + strand at 108.457 kb on + strand at 108.458 kb on - strand at 108.458 kb on - strand at 108.458 kb on - strand at 108.465 kb on + strand at 108.466 kb on - strand at 108.466 kb on - strand at 108.466 kb on - strand at 108.466 kb on - strand at 108.542 kb on - strand at 108.595 kb on + strand at 108.596 kb on - strand at 108.596 kb on - strand at 108.597 kb on + strand at 108.597 kb on + strand at 108.605 kb on + strand at 108.856 kb on + strand, within ABZR86_RS00575 at 108.857 kb on - strand, within ABZR86_RS00575 at 108.985 kb on + strand, within ABZR86_RS00575 at 108.986 kb on - strand, within ABZR86_RS00575 at 108.991 kb on + strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 109.250 kb on - strand, within ABZR86_RS00575
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 106,935 - ABZR86_RS00565 0.29 -0.3 107,057 + ABZR86_RS00565 0.45 +0.0 107,285 + ABZR86_RS00565 0.73 +0.1 107,306 + ABZR86_RS00565 0.76 +0.4 107,306 + ABZR86_RS00565 0.76 +0.3 107,307 - ABZR86_RS00565 0.76 +0.3 107,307 - ABZR86_RS00565 0.76 +0.3 107,307 - ABZR86_RS00565 0.76 +0.4 107,307 - ABZR86_RS00565 0.76 +0.1 107,307 - ABZR86_RS00565 0.76 +0.0 107,502 + +0.4 107,503 - -0.5 107,633 + -0.8 107,634 - +0.2 107,669 + -0.5 107,670 - +0.0 107,670 - +0.8 107,670 - +0.4 107,712 + +0.9 107,712 + -0.3 107,712 + +0.5 107,712 + +0.5 107,713 - +0.4 107,713 - -0.1 107,713 - +0.2 107,713 - -1.5 107,713 - +0.2 107,713 - -0.3 107,724 + -4.0 107,724 + -1.4 107,724 + -1.7 107,724 + +0.2 107,724 + -0.8 107,724 + -2.1 107,724 + -1.7 107,724 + -0.9 107,724 + -0.3 107,724 + -3.8 107,724 + +0.3 107,725 - -0.7 107,725 - -0.7 107,725 - -0.5 107,725 - -0.8 107,725 - -0.7 107,725 - -0.9 107,725 - -1.0 107,725 - -0.6 107,997 + ABZR86_RS00570 0.39 -1.4 108,013 - ABZR86_RS00570 0.41 -0.5 108,150 + ABZR86_RS00570 0.59 -1.6 108,151 - ABZR86_RS00570 0.59 -2.3 108,151 - ABZR86_RS00570 0.59 -0.7 108,352 - ABZR86_RS00570 0.87 -0.8 108,388 - -1.2 108,457 + +0.3 108,457 + -0.4 108,457 + -1.6 108,458 - -1.5 108,458 - -0.2 108,458 - -0.2 108,465 + -0.2 108,466 - +0.5 108,466 - -0.3 108,466 - -1.6 108,466 - +0.0 108,542 - -1.0 108,595 + -0.4 108,596 - -2.1 108,596 - +0.2 108,597 + -0.1 108,597 + +1.0 108,605 + -0.3 108,856 + ABZR86_RS00575 0.26 -1.3 108,857 - ABZR86_RS00575 0.27 +1.4 108,985 + ABZR86_RS00575 0.41 -0.4 108,986 - ABZR86_RS00575 0.41 +0.1 108,991 + ABZR86_RS00575 0.42 +0.6 108,992 - ABZR86_RS00575 0.42 -0.8 108,992 - ABZR86_RS00575 0.42 -0.7 108,992 - ABZR86_RS00575 0.42 -0.8 108,992 - ABZR86_RS00575 0.42 -0.0 108,992 - ABZR86_RS00575 0.42 +0.3 108,992 - ABZR86_RS00575 0.42 +0.1 109,250 - ABZR86_RS00575 0.72 +0.0
Or see this region's nucleotide sequence