Strain Fitness in Sinorhizobium meliloti 1021 around SMc04460

Experiment: Thallium(I) acetate 0.0025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.0025 mg/ml
3,064,297	+		SMc04059	0.42	+0.7
3,064,351	-		SMc04059	0.46	-0.0
3,064,426	+		SMc04059	0.52	-0.4
3,064,426	+		SMc04059	0.52	-0.3
3,064,426	+		SMc04059	0.52	+0.9
3,064,426	+		SMc04059	0.52	-1.8
3,064,426	+		SMc04059	0.52	-0.7
3,064,426	+		SMc04059	0.52	+0.5
3,064,427	-		SMc04059	0.52	-0.4
3,064,427	-		SMc04059	0.52	-2.5
3,064,464	+		SMc04059	0.55	+0.5
3,064,531	+		SMc04059	0.61	+0.9
3,064,720	+		SMc04059	0.76	+2.0
3,064,721	-		SMc04059	0.76	+2.0
3,064,756	+		SMc04059	0.79	-0.4
3,064,756	+		SMc04059	0.79	+0.6
3,064,756	+		SMc04059	0.79	-1.8
3,064,906	-				+1.5
3,064,921	+				+0.2
3,064,921	+				-0.4
3,064,921	+				+0.5
3,064,922	-				-0.5
3,065,131	+				-0.2
3,065,140	+				-0.5
3,065,141	-				+0.3
3,065,177	-				-0.5
3,065,234	+				-0.0
3,065,235	-				-0.7
3,065,235	-				-0.6
3,065,457	+				+0.6
3,065,457	+				-1.3
3,065,481	+				-2.0
3,065,482	-				-0.0
3,065,482	-				+0.6
3,065,484	+				+0.2
3,065,484	+				+0.5
3,065,484	+				-0.1
3,065,484	+				-1.8
3,065,484	+				-0.0
3,065,484	+				-0.1
3,065,485	-				-1.5
3,065,485	-				+0.7
3,065,485	-				-0.3
3,065,513	+		SMc04460	0.11	-1.1
3,065,514	-		SMc04460	0.11	-0.4
3,065,697	+		SMc04460	0.18	-0.2
3,065,698	-		SMc04460	0.18	-0.1
3,065,710	+		SMc04460	0.19	-0.2
3,065,710	+		SMc04460	0.19	+0.3
3,065,711	-		SMc04460	0.19	+0.1
3,065,711	-		SMc04460	0.19	+0.8
3,065,711	-		SMc04460	0.19	-0.6
3,065,711	-		SMc04460	0.19	-0.5
3,065,715	+		SMc04460	0.19	+0.0
3,065,715	+		SMc04460	0.19	+0.2
3,065,716	-		SMc04460	0.19	+0.7
3,065,716	-		SMc04460	0.19	-0.5
3,065,827	-		SMc04460	0.24	+0.8
3,065,886	+		SMc04460	0.26	+1.1
3,065,886	+		SMc04460	0.26	+0.5
3,065,886	+		SMc04460	0.26	-0.4
3,065,887	-		SMc04460	0.26	+0.5
3,065,887	-		SMc04460	0.26	+0.0
3,066,035	+		SMc04460	0.32	+2.0
3,066,035	+		SMc04460	0.32	-0.3
3,066,138	+		SMc04460	0.36	+0.9
3,066,242	+		SMc04460	0.40	+0.7
3,066,242	+		SMc04460	0.40	+0.8
3,066,243	-		SMc04460	0.40	+1.1
3,066,346	-		SMc04460	0.45	+0.9
3,066,347	+		SMc04460	0.45	+0.1
3,066,435	+		SMc04460	0.48	+1.0
3,066,767	+		SMc04460	0.62	+0.0
3,066,768	-		SMc04460	0.62	+3.9
3,066,835	+		SMc04460	0.64	-1.0
3,066,943	-		SMc04460	0.69	+0.9
3,066,944	+		SMc04460	0.69	-1.7
3,067,062	+		SMc04460	0.74	-2.3
3,067,062	+		SMc04460	0.74	+0.2
3,067,062	+		SMc04460	0.74	-0.2
3,067,167	+		SMc04460	0.78	+1.3
3,067,168	-		SMc04460	0.78	+0.4
3,067,521	+				-2.0
3,067,563	+				-0.2
3,067,564	-				-1.0
3,067,564	-				-0.0
3,067,564	-				-0.1
3,067,684	-				-0.5
3,067,844	+				+0.8
3,067,844	+				-1.3
3,067,844	+				-0.5
3,067,844	+				+1.2
3,067,844	+				-0.4
3,067,844	+				+0.8
3,067,844	+				+0.3
3,067,844	+				+0.1
3,067,988	+		SMc03922	0.13	+0.5
3,068,033	+		SMc03922	0.15	+0.4
3,068,034	-		SMc03922	0.15	-0.8
3,068,069	+		SMc03922	0.16	-0.8
3,068,069	+		SMc03922	0.16	+1.0
3,068,069	+		SMc03922	0.16	+0.3
3,068,069	+		SMc03922	0.16	-1.3
3,068,069	+		SMc03922	0.16	+0.0
3,068,069	+		SMc03922	0.16	-0.3
3,068,070	-		SMc03922	0.16	-1.5
3,068,070	-		SMc03922	0.16	-0.2
3,068,070	-		SMc03922	0.16	-0.2
3,068,070	-		SMc03922	0.16	-0.8
3,068,072	+		SMc03922	0.16	-0.5
3,068,073	-		SMc03922	0.16	-0.7
3,068,073	-		SMc03922	0.16	+0.7
3,068,073	-		SMc03922	0.16	+0.8
3,068,074	+		SMc03922	0.17	-0.3
3,068,075	-		SMc03922	0.17	-3.8
3,068,257	+		SMc03922	0.25	-1.2
3,068,293	+		SMc03922	0.26	-0.2
3,068,303	-		SMc03922	0.27	-3.5
3,068,306	+		SMc03922	0.27	-0.1
3,068,306	+		SMc03922	0.27	-1.2
3,068,306	+		SMc03922	0.27	+0.4
3,068,490	-		SMc03922	0.35	-0.9
3,068,585	-		SMc03922	0.40	-1.2
3,068,625	-		SMc03922	0.41	+1.1
3,068,625	-		SMc03922	0.41	-1.0
3,068,630	+		SMc03922	0.42	+0.0
3,068,631	-		SMc03922	0.42	-0.1
3,068,648	+		SMc03922	0.42	-1.0
3,068,648	+		SMc03922	0.42	-0.8