Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04185 and SMc04186 are separated by 89 nucleotides SMc04186 and SMc04187 overlap by 1 nucleotides SMc04187 and SMc04188 are separated by 139 nucleotides SMc04188 and SMc04189 are separated by 25 nucleotides
SMc04185: SMc04185 - glycosyltransferase, at 2,174,240 to 2,175,082
SMc04185
SMc04186: SMc04186 - hypothetical protein, at 2,175,172 to 2,175,636
SMc04186
SMc04187: SMc04187 - DNA packaging protein GP2, at 2,175,636 to 2,177,069
SMc04187
SMc04188: SMc04188 - hypothetical protein, at 2,177,209 to 2,177,550
SMc04188
SMc04189: SMc04189 - hypothetical protein, at 2,177,576 to 2,177,731
SMc04189
Position (kb)
2175
2176
2177
2178 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2174.682 kb on - strand at 2174.682 kb on - strand at 2174.813 kb on + strand at 2174.814 kb on - strand at 2174.935 kb on - strand at 2174.957 kb on - strand at 2175.081 kb on - strand at 2175.145 kb on + strand at 2175.145 kb on + strand at 2175.145 kb on + strand at 2175.146 kb on - strand at 2175.146 kb on - strand at 2175.146 kb on - strand at 2175.173 kb on + strand at 2175.173 kb on + strand at 2175.445 kb on + strand, within SMc04186 at 2175.449 kb on + strand, within SMc04186 at 2175.450 kb on - strand, within SMc04186 at 2175.450 kb on - strand, within SMc04186 at 2175.490 kb on - strand, within SMc04186 at 2175.490 kb on - strand, within SMc04186 at 2175.537 kb on - strand, within SMc04186 at 2175.537 kb on - strand, within SMc04186 at 2175.590 kb on + strand at 2175.604 kb on - strand at 2175.715 kb on + strand at 2175.716 kb on - strand at 2175.716 kb on - strand at 2175.775 kb on + strand at 2175.935 kb on - strand, within SMc04187 at 2176.067 kb on - strand, within SMc04187 at 2176.067 kb on - strand, within SMc04187 at 2176.067 kb on - strand, within SMc04187 at 2176.286 kb on - strand, within SMc04187 at 2176.321 kb on + strand, within SMc04187 at 2176.322 kb on - strand, within SMc04187 at 2176.322 kb on - strand, within SMc04187 at 2176.322 kb on - strand, within SMc04187 at 2176.421 kb on + strand, within SMc04187 at 2176.513 kb on + strand, within SMc04187 at 2176.513 kb on + strand, within SMc04187 at 2176.513 kb on + strand, within SMc04187 at 2176.514 kb on - strand, within SMc04187 at 2176.514 kb on - strand at 2176.555 kb on + strand, within SMc04187 at 2176.555 kb on + strand, within SMc04187 at 2176.747 kb on + strand, within SMc04187 at 2176.747 kb on + strand, within SMc04187 at 2177.062 kb on - strand at 2177.085 kb on + strand at 2177.086 kb on - strand at 2177.086 kb on - strand at 2177.086 kb on - strand at 2177.086 kb on - strand at 2177.086 kb on - strand at 2177.087 kb on + strand at 2177.087 kb on + strand at 2177.087 kb on + strand at 2177.087 kb on + strand at 2177.088 kb on - strand at 2177.088 kb on - strand at 2177.088 kb on - strand at 2177.116 kb on + strand at 2177.122 kb on + strand at 2177.122 kb on + strand at 2177.152 kb on + strand at 2177.152 kb on + strand at 2177.161 kb on + strand at 2177.161 kb on + strand at 2177.162 kb on - strand at 2177.162 kb on - strand at 2177.184 kb on + strand at 2177.184 kb on + strand at 2177.184 kb on + strand at 2177.184 kb on + strand at 2177.184 kb on + strand at 2177.184 kb on + strand at 2177.185 kb on - strand at 2177.185 kb on - strand at 2177.185 kb on - strand at 2177.185 kb on - strand at 2177.185 kb on - strand at 2177.185 kb on - strand at 2177.185 kb on - strand at 2177.185 kb on - strand at 2177.188 kb on + strand at 2177.189 kb on - strand at 2177.323 kb on + strand, within SMc04188 at 2177.323 kb on + strand, within SMc04188 at 2177.324 kb on - strand, within SMc04188 at 2177.324 kb on - strand, within SMc04188 at 2177.326 kb on + strand, within SMc04188 at 2177.326 kb on + strand, within SMc04188 at 2177.327 kb on - strand, within SMc04188 at 2177.327 kb on - strand, within SMc04188 at 2177.377 kb on + strand, within SMc04188 at 2177.377 kb on + strand, within SMc04188 at 2177.377 kb on + strand, within SMc04188 at 2177.377 kb on + strand, within SMc04188 at 2177.432 kb on + strand, within SMc04188 at 2177.433 kb on - strand, within SMc04188 at 2177.433 kb on - strand, within SMc04188 at 2177.646 kb on + strand, within SMc04189 at 2177.708 kb on - strand, within SMc04189 at 2177.731 kb on + strand at 2177.732 kb on - strand at 2177.732 kb on - strand at 2177.732 kb on - strand at 2177.835 kb on + strand at 2177.879 kb on - strand at 2177.879 kb on - strand at 2177.879 kb on - strand at 2177.901 kb on + strand at 2177.904 kb on - strand at 2177.904 kb on - strand at 2177.904 kb on - strand at 2177.904 kb on - strand at 2177.905 kb on + strand at 2177.906 kb on - strand at 2178.007 kb on + strand at 2178.007 kb on + strand at 2178.012 kb on - strand at 2178.012 kb on - strand at 2178.023 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 2,174,682 - -2.2 2,174,682 - -0.2 2,174,813 + +0.5 2,174,814 - +0.3 2,174,935 - +0.8 2,174,957 - +0.8 2,175,081 - +1.0 2,175,145 + +0.4 2,175,145 + +0.4 2,175,145 + -0.5 2,175,146 - -0.3 2,175,146 - +0.2 2,175,146 - +0.3 2,175,173 + -0.2 2,175,173 + -0.2 2,175,445 + SMc04186 0.59 +0.2 2,175,449 + SMc04186 0.60 +0.0 2,175,450 - SMc04186 0.60 -2.2 2,175,450 - SMc04186 0.60 +0.6 2,175,490 - SMc04186 0.68 +1.7 2,175,490 - SMc04186 0.68 -0.7 2,175,537 - SMc04186 0.78 -0.3 2,175,537 - SMc04186 0.78 +0.9 2,175,590 + -0.0 2,175,604 - +1.2 2,175,715 + -1.2 2,175,716 - +0.3 2,175,716 - +0.1 2,175,775 + +0.8 2,175,935 - SMc04187 0.21 -2.7 2,176,067 - SMc04187 0.30 +0.3 2,176,067 - SMc04187 0.30 +0.3 2,176,067 - SMc04187 0.30 +0.7 2,176,286 - SMc04187 0.45 -0.2 2,176,321 + SMc04187 0.48 -0.0 2,176,322 - SMc04187 0.48 -0.1 2,176,322 - SMc04187 0.48 -1.7 2,176,322 - SMc04187 0.48 -0.4 2,176,421 + SMc04187 0.55 +0.6 2,176,513 + SMc04187 0.61 -0.5 2,176,513 + SMc04187 0.61 +0.4 2,176,513 + SMc04187 0.61 -1.7 2,176,514 - SMc04187 0.61 -1.4 2,176,514 - +1.4 2,176,555 + SMc04187 0.64 +0.3 2,176,555 + SMc04187 0.64 +1.4 2,176,747 + SMc04187 0.77 -1.7 2,176,747 + SMc04187 0.77 -0.3 2,177,062 - -3.5 2,177,085 + -0.2 2,177,086 - +0.4 2,177,086 - -2.0 2,177,086 - -0.0 2,177,086 - -2.0 2,177,086 - -0.4 2,177,087 + -1.2 2,177,087 + +0.7 2,177,087 + +2.1 2,177,087 + -0.8 2,177,088 - +0.2 2,177,088 - -0.5 2,177,088 - -0.1 2,177,116 + -0.9 2,177,122 + +0.7 2,177,122 + +0.2 2,177,152 + -0.3 2,177,152 + -0.4 2,177,161 + -0.2 2,177,161 + +1.1 2,177,162 - -0.2 2,177,162 - -1.7 2,177,184 + -0.7 2,177,184 + -2.5 2,177,184 + -0.2 2,177,184 + -0.2 2,177,184 + +0.0 2,177,184 + -1.4 2,177,185 - +0.8 2,177,185 - +3.4 2,177,185 - -0.2 2,177,185 - +0.6 2,177,185 - +1.5 2,177,185 - +0.8 2,177,185 - -0.4 2,177,185 - +1.5 2,177,188 + -0.2 2,177,189 - +0.3 2,177,323 + SMc04188 0.33 +0.5 2,177,323 + SMc04188 0.33 -0.7 2,177,324 - SMc04188 0.34 -0.4 2,177,324 - SMc04188 0.34 +0.2 2,177,326 + SMc04188 0.34 -0.3 2,177,326 + SMc04188 0.34 -0.6 2,177,327 - SMc04188 0.35 -0.1 2,177,327 - SMc04188 0.35 -0.6 2,177,377 + SMc04188 0.49 +0.8 2,177,377 + SMc04188 0.49 -0.3 2,177,377 + SMc04188 0.49 -1.8 2,177,377 + SMc04188 0.49 -1.8 2,177,432 + SMc04188 0.65 -0.4 2,177,433 - SMc04188 0.65 +1.0 2,177,433 - SMc04188 0.65 -0.4 2,177,646 + SMc04189 0.45 +0.0 2,177,708 - SMc04189 0.85 +1.4 2,177,731 + +0.3 2,177,732 - +0.7 2,177,732 - -0.4 2,177,732 - -1.1 2,177,835 + -0.2 2,177,879 - -0.2 2,177,879 - +2.0 2,177,879 - +1.1 2,177,901 + +0.0 2,177,904 - +0.4 2,177,904 - +0.1 2,177,904 - -0.5 2,177,904 - -0.0 2,177,905 + +0.7 2,177,906 - +1.1 2,178,007 + +1.7 2,178,007 + -1.7 2,178,012 - -0.9 2,178,012 - +0.2 2,178,023 + -0.2
Or see this region's nucleotide sequence