Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04142 and SMc04141 are separated by 20 nucleotides SMc04141 and SMc04140 overlap by 4 nucleotides SMc04140 and SMc04139 are separated by 23 nucleotides
SMc04142: SMc04142 - hypothetical protein, at 129,937 to 130,821
SMc04142
SMc04141: SMc04141 - glutathione S-transferase, at 130,842 to 131,483
SMc04141
SMc04140: SMc04140 - ABC transporter ATP-binding protein, at 131,480 to 132,562
SMc04140
SMc04139: SMc04139 - oxidoreductase, at 132,586 to 133,659
SMc04139
Position (kb) 131
132
133 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 131.082 kb on - strand, within SMc04141 at 131.138 kb on - strand, within SMc04141 at 131.470 kb on + strand at 131.471 kb on - strand at 131.896 kb on - strand, within SMc04140 at 131.896 kb on - strand, within SMc04140 at 131.994 kb on + strand, within SMc04140 at 131.994 kb on + strand, within SMc04140 at 131.994 kb on + strand, within SMc04140 at 132.310 kb on - strand, within SMc04140 at 132.310 kb on - strand, within SMc04140 at 132.483 kb on - strand at 132.483 kb on - strand at 132.595 kb on - strand at 132.674 kb on + strand at 132.881 kb on + strand, within SMc04139 at 132.882 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.172 kb on + strand, within SMc04139 at 133.173 kb on - strand, within SMc04139 at 133.173 kb on - strand, within SMc04139 at 133.176 kb on - strand at 133.176 kb on - strand, within SMc04139 at 133.217 kb on + strand, within SMc04139 at 133.218 kb on - strand, within SMc04139 at 133.277 kb on + strand, within SMc04139
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 131,082 - SMc04141 0.37 +0.1 131,138 - SMc04141 0.46 +0.4 131,470 + -0.1 131,471 - -1.8 131,896 - SMc04140 0.38 -0.4 131,896 - SMc04140 0.38 -0.2 131,994 + SMc04140 0.47 -0.4 131,994 + SMc04140 0.47 +0.4 131,994 + SMc04140 0.47 -3.6 132,310 - SMc04140 0.77 -2.4 132,310 - SMc04140 0.77 -0.1 132,483 - -0.1 132,483 - -0.2 132,595 - -2.8 132,674 + -1.9 132,881 + SMc04139 0.27 +0.4 132,882 - SMc04139 0.28 -0.9 133,096 - SMc04139 0.47 +0.8 133,096 - SMc04139 0.47 +0.4 133,096 - SMc04139 0.47 -0.7 133,096 - SMc04139 0.47 -0.4 133,172 + SMc04139 0.55 -0.8 133,173 - SMc04139 0.55 +0.9 133,173 - SMc04139 0.55 +0.3 133,176 - +0.6 133,176 - SMc04139 0.55 -0.3 133,217 + SMc04139 0.59 +0.8 133,218 - SMc04139 0.59 -2.7 133,277 + SMc04139 0.64 +0.7
Or see this region's nucleotide sequence