Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04126 and SMc04125 are separated by 4 nucleotides SMc04125 and SMc04124 are separated by 3 nucleotides SMc04124 and SMc04123 overlap by 4 nucleotides
SMc04126: SMc04126 - ABC transporter permease, at 149,339 to 150,472
SMc04126
SMc04125: SMc04125 - ABC transporter permease, at 150,477 to 151,448
SMc04125
SMc04124: SMc04124 - cytidine deaminase, at 151,452 to 151,910
SMc04124
SMc04123: SMc04123 - purine nucleoside phosphorylase, at 151,907 to 152,704
SMc04123
Position (kb) 150
151
152 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 149.509 kb on + strand, within SMc04126 at 149.509 kb on + strand, within SMc04126 at 149.510 kb on - strand, within SMc04126 at 149.615 kb on + strand, within SMc04126 at 149.616 kb on + strand, within SMc04126 at 149.616 kb on - strand, within SMc04126 at 149.675 kb on + strand, within SMc04126 at 149.675 kb on + strand, within SMc04126 at 149.676 kb on - strand, within SMc04126 at 149.770 kb on + strand, within SMc04126 at 149.770 kb on + strand, within SMc04126 at 149.771 kb on - strand, within SMc04126 at 149.804 kb on - strand, within SMc04126 at 149.822 kb on + strand, within SMc04126 at 149.823 kb on - strand, within SMc04126 at 149.823 kb on - strand, within SMc04126 at 149.823 kb on - strand, within SMc04126 at 150.117 kb on + strand, within SMc04126 at 150.924 kb on + strand, within SMc04125 at 150.925 kb on - strand, within SMc04125 at 150.960 kb on + strand, within SMc04125 at 150.960 kb on + strand, within SMc04125 at 150.961 kb on - strand, within SMc04125 at 151.003 kb on - strand, within SMc04125 at 151.197 kb on + strand, within SMc04125 at 151.197 kb on + strand, within SMc04125 at 151.197 kb on + strand, within SMc04125 at 151.198 kb on - strand, within SMc04125 at 151.244 kb on + strand, within SMc04125 at 151.244 kb on + strand, within SMc04125 at 151.244 kb on + strand, within SMc04125 at 151.245 kb on - strand, within SMc04125 at 151.362 kb on - strand at 151.362 kb on - strand at 151.426 kb on + strand at 151.432 kb on - strand at 151.490 kb on + strand at 151.490 kb on + strand at 151.490 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.496 kb on + strand at 151.497 kb on - strand at 151.497 kb on - strand at 151.497 kb on - strand at 151.500 kb on + strand, within SMc04124 at 151.501 kb on - strand, within SMc04124 at 151.501 kb on - strand, within SMc04124 at 151.502 kb on + strand, within SMc04124 at 151.626 kb on + strand, within SMc04124 at 151.626 kb on + strand at 151.626 kb on + strand, within SMc04124 at 151.627 kb on - strand, within SMc04124 at 151.627 kb on - strand, within SMc04124 at 151.627 kb on - strand, within SMc04124 at 151.697 kb on + strand, within SMc04124 at 151.698 kb on - strand, within SMc04124 at 151.825 kb on - strand, within SMc04124 at 152.030 kb on + strand, within SMc04123 at 152.031 kb on - strand, within SMc04123 at 152.141 kb on + strand, within SMc04123 at 152.145 kb on - strand, within SMc04123 at 152.145 kb on - strand, within SMc04123 at 152.145 kb on - strand, within SMc04123 at 152.145 kb on - strand, within SMc04123 at 152.361 kb on - strand, within SMc04123 at 152.361 kb on - strand, within SMc04123 at 152.432 kb on + strand, within SMc04123 at 152.432 kb on + strand, within SMc04123 at 152.433 kb on - strand, within SMc04123 at 152.434 kb on + strand, within SMc04123 at 152.434 kb on + strand, within SMc04123 at 152.434 kb on + strand, within SMc04123 at 152.434 kb on + strand, within SMc04123 at 152.435 kb on - strand, within SMc04123 at 152.435 kb on - strand, within SMc04123 at 152.435 kb on - strand, within SMc04123 at 152.435 kb on - strand, within SMc04123
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 149,509 + SMc04126 0.15 +0.8 149,509 + SMc04126 0.15 -1.8 149,510 - SMc04126 0.15 -0.7 149,615 + SMc04126 0.24 -0.5 149,616 + SMc04126 0.24 -2.1 149,616 - SMc04126 0.24 -0.9 149,675 + SMc04126 0.30 +0.8 149,675 + SMc04126 0.30 -2.5 149,676 - SMc04126 0.30 +0.8 149,770 + SMc04126 0.38 +3.8 149,770 + SMc04126 0.38 -0.1 149,771 - SMc04126 0.38 -0.8 149,804 - SMc04126 0.41 -0.0 149,822 + SMc04126 0.43 +0.0 149,823 - SMc04126 0.43 -1.9 149,823 - SMc04126 0.43 +0.1 149,823 - SMc04126 0.43 +0.2 150,117 + SMc04126 0.69 -0.1 150,924 + SMc04125 0.46 -0.0 150,925 - SMc04125 0.46 +1.6 150,960 + SMc04125 0.50 -0.0 150,960 + SMc04125 0.50 +1.2 150,961 - SMc04125 0.50 -0.9 151,003 - SMc04125 0.54 -0.1 151,197 + SMc04125 0.74 +1.2 151,197 + SMc04125 0.74 +2.0 151,197 + SMc04125 0.74 +0.8 151,198 - SMc04125 0.74 +1.2 151,244 + SMc04125 0.79 +0.3 151,244 + SMc04125 0.79 +0.2 151,244 + SMc04125 0.79 +0.9 151,245 - SMc04125 0.79 -0.8 151,362 - +0.1 151,362 - -1.2 151,426 + +2.1 151,432 - +0.0 151,490 + -2.5 151,490 + -0.3 151,490 + +0.8 151,496 + -2.0 151,496 + -0.2 151,496 + -0.9 151,496 + -1.1 151,496 + -0.6 151,496 + -1.5 151,496 + +1.7 151,496 + +0.7 151,496 + -0.2 151,497 - +3.3 151,497 - -1.4 151,497 - -0.2 151,500 + SMc04124 0.10 +0.7 151,501 - SMc04124 0.11 -2.5 151,501 - SMc04124 0.11 +0.2 151,502 + SMc04124 0.11 -0.0 151,626 + SMc04124 0.38 +0.1 151,626 + +0.2 151,626 + SMc04124 0.38 -0.5 151,627 - SMc04124 0.38 +1.5 151,627 - SMc04124 0.38 +0.0 151,627 - SMc04124 0.38 +0.0 151,697 + SMc04124 0.53 +2.5 151,698 - SMc04124 0.54 +2.1 151,825 - SMc04124 0.81 -0.7 152,030 + SMc04123 0.15 +0.5 152,031 - SMc04123 0.16 -1.4 152,141 + SMc04123 0.29 -1.5 152,145 - SMc04123 0.30 -1.6 152,145 - SMc04123 0.30 +0.2 152,145 - SMc04123 0.30 -0.5 152,145 - SMc04123 0.30 -0.4 152,361 - SMc04123 0.57 +0.5 152,361 - SMc04123 0.57 -0.4 152,432 + SMc04123 0.66 -4.3 152,432 + SMc04123 0.66 +0.0 152,433 - SMc04123 0.66 -0.0 152,434 + SMc04123 0.66 -0.4 152,434 + SMc04123 0.66 -0.8 152,434 + SMc04123 0.66 -0.0 152,434 + SMc04123 0.66 -0.5 152,435 - SMc04123 0.66 +0.1 152,435 - SMc04123 0.66 -0.0 152,435 - SMc04123 0.66 +0.6 152,435 - SMc04123 0.66 +1.5
Or see this region's nucleotide sequence