Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04120 and SMc04119 overlap by 4 nucleotides SMc04119 and SMc04118 are separated by 220 nucleotides SMc04118 and SMc04117 are separated by 7 nucleotides
SMc04120: SMc04120 - adenosine deaminase, at 154,871 to 155,845
SMc04120
SMc04119: SMc04119 - phosphopentomutase, at 155,842 to 157,062
SMc04119
SMc04118: SMc04118 - hypothetical protein, at 157,283 to 157,867
SMc04118
SMc04117: SMc04117 - hypothetical protein, at 157,875 to 158,489
SMc04117
Position (kb) 155
156
157
158 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 154.873 kb on - strand at 154.880 kb on + strand at 154.880 kb on + strand at 154.881 kb on - strand at 154.999 kb on - strand, within SMc04120 at 155.409 kb on + strand, within SMc04120 at 155.528 kb on - strand, within SMc04120 at 155.529 kb on + strand, within SMc04120 at 155.529 kb on + strand, within SMc04120 at 155.590 kb on - strand, within SMc04120 at 155.596 kb on + strand, within SMc04120 at 155.622 kb on + strand, within SMc04120 at 155.622 kb on + strand, within SMc04120 at 155.623 kb on - strand, within SMc04120 at 155.643 kb on + strand, within SMc04120 at 155.682 kb on + strand, within SMc04120 at 155.718 kb on + strand, within SMc04120 at 155.719 kb on - strand, within SMc04120 at 155.719 kb on - strand, within SMc04120 at 156.141 kb on - strand, within SMc04119 at 156.141 kb on - strand, within SMc04119 at 156.279 kb on + strand, within SMc04119 at 156.551 kb on + strand, within SMc04119 at 156.551 kb on + strand, within SMc04119 at 156.552 kb on - strand, within SMc04119 at 156.552 kb on - strand, within SMc04119 at 156.552 kb on - strand, within SMc04119 at 156.552 kb on - strand, within SMc04119 at 156.552 kb on - strand, within SMc04119 at 156.576 kb on + strand, within SMc04119 at 156.576 kb on + strand, within SMc04119 at 156.576 kb on + strand, within SMc04119 at 156.577 kb on - strand, within SMc04119 at 156.577 kb on - strand, within SMc04119 at 156.577 kb on - strand, within SMc04119 at 156.710 kb on + strand, within SMc04119 at 156.800 kb on + strand, within SMc04119 at 156.810 kb on - strand, within SMc04119 at 156.810 kb on - strand, within SMc04119 at 157.118 kb on + strand at 157.118 kb on + strand at 157.235 kb on - strand at 157.235 kb on - strand at 157.329 kb on + strand at 157.329 kb on + strand at 157.329 kb on + strand at 157.330 kb on - strand at 157.575 kb on + strand, within SMc04118 at 157.591 kb on - strand, within SMc04118 at 157.746 kb on + strand, within SMc04118 at 157.747 kb on - strand, within SMc04118 at 157.747 kb on - strand, within SMc04118 at 157.747 kb on - strand, within SMc04118 at 157.879 kb on + strand at 157.880 kb on - strand at 157.918 kb on + strand at 157.919 kb on - strand at 157.999 kb on + strand, within SMc04117 at 158.002 kb on + strand, within SMc04117 at 158.002 kb on + strand, within SMc04117 at 158.002 kb on + strand, within SMc04117 at 158.002 kb on + strand, within SMc04117 at 158.010 kb on + strand, within SMc04117 at 158.020 kb on + strand, within SMc04117
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 154,873 - -1.6 154,880 + -0.1 154,880 + -0.3 154,881 - +1.8 154,999 - SMc04120 0.13 -0.0 155,409 + SMc04120 0.55 +0.6 155,528 - SMc04120 0.67 -0.0 155,529 + SMc04120 0.67 +0.1 155,529 + SMc04120 0.67 -3.0 155,590 - SMc04120 0.74 -0.4 155,596 + SMc04120 0.74 +0.5 155,622 + SMc04120 0.77 +1.6 155,622 + SMc04120 0.77 +0.5 155,623 - SMc04120 0.77 -1.2 155,643 + SMc04120 0.79 +2.2 155,682 + SMc04120 0.83 +0.2 155,718 + SMc04120 0.87 -0.2 155,719 - SMc04120 0.87 +2.4 155,719 - SMc04120 0.87 -1.0 156,141 - SMc04119 0.24 +0.4 156,141 - SMc04119 0.24 +0.5 156,279 + SMc04119 0.36 +0.7 156,551 + SMc04119 0.58 -1.4 156,551 + SMc04119 0.58 +0.4 156,552 - SMc04119 0.58 +0.2 156,552 - SMc04119 0.58 +0.2 156,552 - SMc04119 0.58 +2.2 156,552 - SMc04119 0.58 +2.2 156,552 - SMc04119 0.58 -0.0 156,576 + SMc04119 0.60 -0.5 156,576 + SMc04119 0.60 +2.3 156,576 + SMc04119 0.60 +0.1 156,577 - SMc04119 0.60 -1.1 156,577 - SMc04119 0.60 +0.9 156,577 - SMc04119 0.60 +0.6 156,710 + SMc04119 0.71 -0.1 156,800 + SMc04119 0.78 +0.2 156,810 - SMc04119 0.79 -0.3 156,810 - SMc04119 0.79 -2.3 157,118 + +0.8 157,118 + +0.5 157,235 - +0.8 157,235 - -0.3 157,329 + +0.8 157,329 + -0.4 157,329 + +0.9 157,330 - +0.8 157,575 + SMc04118 0.50 -1.0 157,591 - SMc04118 0.53 -0.6 157,746 + SMc04118 0.79 +0.2 157,747 - SMc04118 0.79 +0.2 157,747 - SMc04118 0.79 -0.1 157,747 - SMc04118 0.79 -0.2 157,879 + +1.2 157,880 - +2.4 157,918 + -0.1 157,919 - -0.1 157,999 + SMc04117 0.20 -0.1 158,002 + SMc04117 0.21 +0.7 158,002 + SMc04117 0.21 +1.6 158,002 + SMc04117 0.21 +2.6 158,002 + SMc04117 0.21 -0.3 158,010 + SMc04117 0.22 -0.3 158,020 + SMc04117 0.24 -0.1
Or see this region's nucleotide sequence