Strain Fitness in Sinorhizobium meliloti 1021 around SMc04090
Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.0025 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,631,665 | - | +0.5 | |||
| 3,631,665 | - | +1.5 | |||
| 3,631,665 | - | +0.1 | |||
| 3,631,673 | - | -1.6 | |||
| 3,631,694 | - | +0.2 | |||
| 3,631,783 | + | -2.4 | |||
| 3,632,015 | + | SMc04090 | 0.19 | +1.1 | |
| 3,632,547 | + | SMc04090 | 0.56 | -0.8 | |
| 3,632,590 | + | SMc04090 | 0.59 | -3.5 | |
| 3,632,882 | + | SMc04090 | 0.80 | -0.5 | |
| 3,632,957 | - | SMc04090 | 0.85 | -1.6 | |
| 3,633,150 | - | +0.0 | |||
| 3,633,247 | + | +0.3 | |||
| 3,633,388 | + | SMc04091 | 0.23 | +0.1 | |
| 3,633,388 | + | SMc04091 | 0.23 | -3.0 | |
| 3,633,388 | + | SMc04091 | 0.23 | -1.5 | |
| 3,633,389 | - | SMc04091 | 0.23 | -0.2 | |
| 3,633,492 | - | SMc04091 | 0.34 | -1.9 | |
| 3,633,492 | - | SMc04091 | 0.34 | -0.6 | |
| 3,633,520 | - | SMc04091 | 0.37 | -0.4 | |
| 3,633,529 | + | SMc04091 | 0.38 | -0.5 | |
| 3,633,529 | + | SMc04091 | 0.38 | -1.4 | |
| 3,633,530 | - | SMc04091 | 0.38 | -2.6 | |
| 3,633,549 | - | SMc04091 | 0.40 | -0.0 | |
| 3,633,762 | + | SMc04091 | 0.62 | -0.1 | |
| 3,633,916 | - | SMc04091 | 0.78 | -0.3 | |
| 3,633,919 | - | SMc04091 | 0.79 | -1.9 | |
| 3,634,059 | + | +1.1 | |||
| 3,634,060 | - | -0.4 | |||
| 3,634,060 | - | -1.9 |
Or see this region's nucleotide sequence