Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03248 and SMc03249 overlap by 4 nucleotides SMc03249 and SMc03751 are separated by 76 nucleotides SMc03751 and SMc03250 overlap by 20 nucleotides SMc03250 and SMc03251 are separated by 940 nucleotides
SMc03248: SMc03248 - transposase, at 3,361,899 to 3,362,729
SMc03248
SMc03249: SMc03249 - hypothetical protein, at 3,362,726 to 3,362,983
SMc03249
SMc03751: SMc03751 - hypothetical protein, at 3,363,060 to 3,363,509
SMc03751
SMc03250: SMc03250 - hypothetical protein, at 3,363,490 to 3,363,951
SMc03250
SMc03251: SMc03251 - hypothetical protein, at 3,364,892 to 3,365,899
SMc03251
Position (kb)
3363
3364 Strain fitness (log2 ratio)
-1
0
1
2 at 3362.654 kb on - strand at 3362.654 kb on - strand at 3362.814 kb on - strand, within SMc03249 at 3362.814 kb on - strand at 3363.061 kb on + strand at 3363.061 kb on + strand at 3363.062 kb on - strand at 3363.062 kb on - strand at 3363.089 kb on + strand at 3363.090 kb on - strand at 3363.173 kb on + strand, within SMc03751 at 3363.478 kb on + strand at 3363.511 kb on - strand at 3363.852 kb on + strand, within SMc03250 at 3363.853 kb on - strand, within SMc03250 at 3363.853 kb on - strand, within SMc03250 at 3364.018 kb on + strand at 3364.019 kb on - strand at 3364.019 kb on - strand at 3364.166 kb on - strand at 3364.166 kb on - strand at 3364.335 kb on + strand at 3364.335 kb on + strand at 3364.391 kb on - strand at 3364.549 kb on + strand at 3364.550 kb on - strand at 3364.550 kb on - strand at 3364.553 kb on - strand at 3364.652 kb on + strand at 3364.653 kb on - strand at 3364.701 kb on + strand at 3364.866 kb on + strand at 3364.902 kb on + strand at 3364.903 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 3,362,654 - +0.1 3,362,654 - +0.3 3,362,814 - SMc03249 0.34 -0.2 3,362,814 - +0.3 3,363,061 + -0.6 3,363,061 + +0.6 3,363,062 - +0.0 3,363,062 - +0.2 3,363,089 + +1.2 3,363,090 - -0.1 3,363,173 + SMc03751 0.25 +0.1 3,363,478 + -0.2 3,363,511 - +0.0 3,363,852 + SMc03250 0.78 -0.9 3,363,853 - SMc03250 0.79 +0.5 3,363,853 - SMc03250 0.79 +1.6 3,364,018 + +0.6 3,364,019 - -0.1 3,364,019 - +0.8 3,364,166 - -0.9 3,364,166 - +0.8 3,364,335 + +0.5 3,364,335 + +0.3 3,364,391 - -1.5 3,364,549 + -0.2 3,364,550 - -0.5 3,364,550 - -0.7 3,364,553 - +0.6 3,364,652 + +1.7 3,364,653 - -1.3 3,364,701 + +1.5 3,364,866 + +1.9 3,364,902 + -1.5 3,364,903 - -1.2
Or see this region's nucleotide sequence