Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02609 and SMc02610 are separated by 50 nucleotides SMc02610 and SMc02611 are separated by 37 nucleotides SMc02611 and SMc02612 are separated by 14 nucleotides
SMc02609: SMc02609 - transcriptional regulator, at 102,517 to 103,491
SMc02609
SMc02610: SMc02610 - amidotransferase, at 103,542 to 104,504
SMc02610
SMc02611: SMc02611 - oxidoreductase, at 104,542 to 105,228
SMc02611
SMc02612: SMc02612 - oxidoreductase, at 105,243 to 106,571
SMc02612
Position (kb)
103
104
105 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 102.592 kb on + strand at 102.649 kb on + strand, within SMc02609 at 102.750 kb on + strand, within SMc02609 at 102.750 kb on + strand, within SMc02609 at 102.796 kb on - strand, within SMc02609 at 102.858 kb on - strand, within SMc02609 at 102.858 kb on - strand, within SMc02609 at 103.099 kb on + strand, within SMc02609 at 103.100 kb on - strand, within SMc02609 at 103.394 kb on - strand at 103.394 kb on - strand at 103.394 kb on - strand at 103.562 kb on + strand at 103.592 kb on + strand at 103.592 kb on + strand at 103.722 kb on + strand, within SMc02610 at 103.722 kb on + strand, within SMc02610 at 103.723 kb on - strand, within SMc02610 at 103.924 kb on + strand, within SMc02610 at 103.924 kb on + strand, within SMc02610 at 103.925 kb on - strand, within SMc02610 at 103.925 kb on - strand, within SMc02610 at 103.925 kb on - strand, within SMc02610 at 103.959 kb on + strand, within SMc02610 at 104.006 kb on - strand, within SMc02610 at 104.006 kb on - strand, within SMc02610 at 104.040 kb on - strand, within SMc02610 at 104.120 kb on + strand, within SMc02610 at 104.217 kb on + strand, within SMc02610 at 104.218 kb on - strand, within SMc02610 at 104.297 kb on + strand, within SMc02610 at 104.298 kb on - strand, within SMc02610 at 104.385 kb on + strand, within SMc02610 at 104.385 kb on + strand, within SMc02610 at 104.385 kb on + strand, within SMc02610 at 104.386 kb on - strand, within SMc02610 at 104.473 kb on + strand at 104.474 kb on - strand at 104.474 kb on - strand at 104.475 kb on + strand at 104.476 kb on - strand at 104.542 kb on - strand at 104.550 kb on + strand at 104.586 kb on + strand at 104.586 kb on + strand at 104.587 kb on - strand at 104.598 kb on + strand at 104.629 kb on + strand, within SMc02611 at 104.630 kb on - strand, within SMc02611 at 104.630 kb on - strand, within SMc02611 at 104.833 kb on + strand, within SMc02611 at 104.946 kb on + strand, within SMc02611 at 104.947 kb on - strand, within SMc02611 at 104.947 kb on - strand, within SMc02611 at 104.947 kb on - strand, within SMc02611 at 104.947 kb on - strand, within SMc02611 at 105.022 kb on + strand, within SMc02611 at 105.042 kb on - strand, within SMc02611 at 105.172 kb on + strand at 105.172 kb on + strand at 105.226 kb on + strand at 105.243 kb on - strand at 105.243 kb on - strand at 105.249 kb on + strand at 105.261 kb on + strand at 105.261 kb on + strand at 105.261 kb on + strand at 105.262 kb on - strand at 105.262 kb on - strand at 105.262 kb on - strand at 105.262 kb on - strand at 105.262 kb on - strand at 105.263 kb on + strand at 105.263 kb on + strand at 105.264 kb on - strand at 105.297 kb on + strand at 105.297 kb on + strand at 105.297 kb on + strand at 105.297 kb on + strand at 105.297 kb on + strand at 105.299 kb on + strand at 105.300 kb on - strand at 105.300 kb on - strand at 105.340 kb on - strand at 105.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 102,592 + +0.7 102,649 + SMc02609 0.14 +1.5 102,750 + SMc02609 0.24 -1.1 102,750 + SMc02609 0.24 -0.8 102,796 - SMc02609 0.29 -1.3 102,858 - SMc02609 0.35 -0.3 102,858 - SMc02609 0.35 +1.1 103,099 + SMc02609 0.60 -0.5 103,100 - SMc02609 0.60 -0.9 103,394 - +0.1 103,394 - -0.1 103,394 - +1.2 103,562 + -0.8 103,592 + -0.8 103,592 + +0.1 103,722 + SMc02610 0.19 +0.0 103,722 + SMc02610 0.19 +1.2 103,723 - SMc02610 0.19 +1.0 103,924 + SMc02610 0.40 +0.5 103,924 + SMc02610 0.40 +1.9 103,925 - SMc02610 0.40 -0.4 103,925 - SMc02610 0.40 -0.8 103,925 - SMc02610 0.40 -3.1 103,959 + SMc02610 0.43 -1.1 104,006 - SMc02610 0.48 +0.2 104,006 - SMc02610 0.48 +0.8 104,040 - SMc02610 0.52 -2.0 104,120 + SMc02610 0.60 -0.1 104,217 + SMc02610 0.70 -1.7 104,218 - SMc02610 0.70 +0.2 104,297 + SMc02610 0.78 -0.6 104,298 - SMc02610 0.79 -1.1 104,385 + SMc02610 0.88 -0.3 104,385 + SMc02610 0.88 -0.5 104,385 + SMc02610 0.88 -0.4 104,386 - SMc02610 0.88 +0.1 104,473 + -0.1 104,474 - +0.3 104,474 - +0.7 104,475 + +1.2 104,476 - +0.4 104,542 - -1.9 104,550 + +0.2 104,586 + -0.2 104,586 + +0.3 104,587 - -0.7 104,598 + -3.4 104,629 + SMc02611 0.13 +1.5 104,630 - SMc02611 0.13 -0.8 104,630 - SMc02611 0.13 +0.2 104,833 + SMc02611 0.42 +0.0 104,946 + SMc02611 0.59 +0.6 104,947 - SMc02611 0.59 +1.0 104,947 - SMc02611 0.59 -0.1 104,947 - SMc02611 0.59 -0.7 104,947 - SMc02611 0.59 +0.2 105,022 + SMc02611 0.70 -0.4 105,042 - SMc02611 0.73 -2.4 105,172 + +0.2 105,172 + +0.3 105,226 + +1.5 105,243 - -1.4 105,243 - +0.2 105,249 + -2.4 105,261 + -0.1 105,261 + +0.3 105,261 + +0.3 105,262 - +0.0 105,262 - +0.3 105,262 - +0.4 105,262 - -0.5 105,262 - -1.1 105,263 + -0.0 105,263 + +0.1 105,264 - -2.1 105,297 + +1.2 105,297 + -0.3 105,297 + -1.6 105,297 + +0.9 105,297 + -1.0 105,299 + +1.3 105,300 - -0.2 105,300 - +0.8 105,340 - +0.1 105,340 - -0.6
Or see this region's nucleotide sequence