Strain Fitness in Sinorhizobium meliloti 1021 around SMc02594
Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
90,286 | + | SMc02592 | 0.63 | -1.0 | |
90,287 | - | SMc02592 | 0.63 | +0.9 | |
90,287 | - | SMc02592 | 0.63 | -1.0 | |
90,424 | + | SMc02592 | 0.87 | +0.4 | |
90,424 | + | SMc02592 | 0.87 | -0.5 | |
90,424 | + | SMc02592 | 0.87 | -0.1 | |
90,425 | - | SMc02592 | 0.87 | -0.4 | |
90,486 | - | -0.3 | |||
90,546 | - | +0.1 | |||
90,738 | + | SMc02593 | 0.38 | -1.5 | |
90,739 | - | SMc02593 | 0.38 | -2.0 | |
90,739 | - | SMc02593 | 0.38 | +0.5 | |
91,071 | + | +1.0 | |||
91,147 | + | -1.1 | |||
91,147 | + | -0.3 | |||
91,298 | - | SMc02594 | 0.11 | -0.9 | |
91,367 | + | SMc02594 | 0.22 | -0.1 | |
91,367 | + | SMc02594 | 0.22 | -2.6 | |
91,367 | + | SMc02594 | 0.22 | -0.3 | |
91,367 | + | SMc02594 | 0.22 | -0.6 | |
91,368 | - | SMc02594 | 0.22 | -0.2 | |
91,370 | + | SMc02594 | 0.22 | -2.0 | |
91,371 | - | SMc02594 | 0.22 | -1.5 | |
91,371 | - | SMc02594 | 0.22 | -0.8 | |
91,432 | + | SMc02594 | 0.31 | -0.3 | |
91,471 | + | SMc02594 | 0.37 | +0.5 | |
91,583 | - | SMc02594 | 0.54 | -0.7 | |
91,675 | + | SMc02594 | 0.68 | -0.9 | |
91,676 | - | SMc02594 | 0.68 | -0.2 | |
91,723 | + | SMc02594 | 0.75 | -2.5 | |
91,723 | + | SMc02594 | 0.75 | -1.3 | |
91,724 | - | SMc02594 | 0.75 | +0.4 | |
91,724 | - | SMc02594 | 0.75 | +0.1 | |
91,872 | + | +1.3 | |||
91,899 | - | -0.7 | |||
91,956 | - | -0.3 | |||
91,967 | + | -0.5 | |||
91,967 | + | +1.1 | |||
91,968 | - | -2.5 | |||
92,120 | + | SMc02595 | 0.16 | -1.6 | |
92,120 | + | SMc02595 | 0.16 | +0.6 | |
92,120 | + | SMc02595 | 0.16 | -0.5 | |
92,120 | + | SMc02595 | 0.16 | +0.4 | |
92,242 | + | SMc02595 | 0.26 | -0.4 | |
92,278 | + | SMc02595 | 0.29 | -0.5 | |
92,278 | + | SMc02595 | 0.29 | +0.4 | |
92,278 | + | SMc02595 | 0.29 | -1.8 |
Or see this region's nucleotide sequence