Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02557 and SMc02556 are separated by 15 nucleotides SMc02556 and SMc02555 are separated by 158 nucleotides SMc02555 and SMc02554 overlap by 4 nucleotides SMc02554 and SMc02553 overlap by 2 nucleotides
SMc02557: SMc02557 - hypothetical protein, at 1,205,538 to 1,206,281
SMc02557
SMc02556: SMc02556 - hypothetical protein, at 1,206,297 to 1,206,566
SMc02556
SMc02555: SMc02555 - signal peptide protein, at 1,206,725 to 1,207,168
SMc02555
SMc02554: SMc02554 - hypothetical protein, at 1,207,165 to 1,207,629
SMc02554
SMc02553: SMc02553 - hypothetical protein, at 1,207,628 to 1,208,458
SMc02553
Position (kb)
1207
1208 Strain fitness (log2 ratio)
-1
0
1
2 at 1206.579 kb on - strand at 1206.579 kb on - strand at 1206.651 kb on - strand at 1206.651 kb on - strand at 1206.671 kb on - strand at 1206.718 kb on + strand at 1206.719 kb on - strand at 1206.719 kb on - strand at 1206.727 kb on - strand at 1207.400 kb on - strand, within SMc02554 at 1207.416 kb on - strand, within SMc02554 at 1207.416 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.662 kb on - strand at 1207.662 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.992 kb on + strand, within SMc02553 at 1207.993 kb on - strand, within SMc02553 at 1207.993 kb on - strand, within SMc02553 at 1208.164 kb on + strand, within SMc02553 at 1208.309 kb on + strand, within SMc02553 at 1208.391 kb on + strand at 1208.391 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,206,579 - +0.8 1,206,579 - +0.8 1,206,651 - -0.6 1,206,651 - -0.2 1,206,671 - +0.5 1,206,718 + -1.4 1,206,719 - +0.9 1,206,719 - +0.8 1,206,727 - +1.9 1,207,400 - SMc02554 0.51 +0.6 1,207,416 - SMc02554 0.54 -1.2 1,207,416 - SMc02554 0.54 +1.1 1,207,530 - SMc02554 0.78 -0.8 1,207,530 - SMc02554 0.78 +1.1 1,207,530 - SMc02554 0.78 +1.7 1,207,530 - SMc02554 0.78 +0.2 1,207,662 - +2.5 1,207,662 - +0.4 1,207,665 - +1.4 1,207,665 - +1.1 1,207,665 - +1.0 1,207,665 - +0.2 1,207,665 - +1.1 1,207,992 + SMc02553 0.44 +0.4 1,207,993 - SMc02553 0.44 +0.4 1,207,993 - SMc02553 0.44 +1.3 1,208,164 + SMc02553 0.65 +0.4 1,208,309 + SMc02553 0.82 +0.2 1,208,391 + -0.6 1,208,391 + -0.4
Or see this region's nucleotide sequence