Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01772 and SMc01773 are separated by 0 nucleotides SMc01773 and SMc01774 are separated by 86 nucleotides SMc01774 and SMc01775 are separated by 413 nucleotides SMc01775 and SMc01776 are separated by 36 nucleotides
SMc01772: SMc01772 - riboflavin biosynthesis protein, at 1,318,702 to 1,319,907
SMc01772
SMc01773: SMc01773 - riboflavin synthase subunit alpha, at 1,319,908 to 1,320,528
SMc01773
SMc01774: SMc01774 - hypothetical protein, at 1,320,615 to 1,320,965
SMc01774
SMc01775: SMc01775 - acetyltransferase, at 1,321,379 to 1,321,918
SMc01775
SMc01776: SMc01776 - auxin-binding protein, at 1,321,955 to 1,322,458
SMc01776
Position (kb)
1320
1321 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1319.901 kb on + strand at 1319.901 kb on + strand at 1319.901 kb on + strand at 1320.526 kb on + strand at 1320.625 kb on + strand at 1320.625 kb on + strand at 1320.625 kb on + strand at 1320.780 kb on - strand, within SMc01774 at 1320.806 kb on + strand, within SMc01774 at 1321.075 kb on - strand at 1321.297 kb on + strand at 1321.380 kb on + strand at 1321.380 kb on + strand at 1321.381 kb on - strand at 1321.381 kb on - strand at 1321.433 kb on - strand, within SMc01775 at 1321.433 kb on - strand, within SMc01775 at 1321.434 kb on + strand, within SMc01775 at 1321.435 kb on - strand, within SMc01775 at 1321.435 kb on - strand, within SMc01775 at 1321.738 kb on - strand, within SMc01775 at 1321.738 kb on - strand, within SMc01775 at 1321.791 kb on + strand, within SMc01775 at 1321.791 kb on + strand, within SMc01775 at 1321.792 kb on - strand, within SMc01775 at 1321.807 kb on + strand, within SMc01775 at 1321.808 kb on - strand, within SMc01775 at 1321.809 kb on + strand, within SMc01775 at 1321.845 kb on + strand, within SMc01775 at 1321.846 kb on - strand, within SMc01775 at 1321.846 kb on - strand at 1321.884 kb on - strand at 1321.932 kb on - strand at 1321.950 kb on - strand at 1321.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,319,901 + +0.2 1,319,901 + -0.5 1,319,901 + +0.3 1,320,526 + -0.4 1,320,625 + +0.7 1,320,625 + +0.0 1,320,625 + +0.2 1,320,780 - SMc01774 0.47 -1.6 1,320,806 + SMc01774 0.54 -0.2 1,321,075 - -0.6 1,321,297 + +3.2 1,321,380 + +1.4 1,321,380 + +1.9 1,321,381 - +1.2 1,321,381 - +0.3 1,321,433 - SMc01775 0.10 -0.6 1,321,433 - SMc01775 0.10 +0.1 1,321,434 + SMc01775 0.10 -0.1 1,321,435 - SMc01775 0.10 +0.6 1,321,435 - SMc01775 0.10 +3.5 1,321,738 - SMc01775 0.66 -0.7 1,321,738 - SMc01775 0.66 +0.4 1,321,791 + SMc01775 0.76 +0.5 1,321,791 + SMc01775 0.76 -0.9 1,321,792 - SMc01775 0.76 +0.8 1,321,807 + SMc01775 0.79 +1.6 1,321,808 - SMc01775 0.79 -0.3 1,321,809 + SMc01775 0.80 +0.6 1,321,845 + SMc01775 0.86 -2.3 1,321,846 - SMc01775 0.86 -0.1 1,321,846 - -0.7 1,321,884 - +0.2 1,321,932 - +1.3 1,321,950 - +0.4 1,321,950 - -0.6
Or see this region's nucleotide sequence