Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01666 and SMc01667 are separated by 258 nucleotides SMc01667 and SMc01668 overlap by 4 nucleotides SMc01668 and SMc01669 are separated by 84 nucleotides
SMc01666: SMc01666 - methionine gamma-lyase, at 2,469,621 to 2,470,904
SMc01666
SMc01667: SMc01667 - hypothetical protein, at 2,471,163 to 2,471,525
SMc01667
SMc01668: SMc01668 - transcriptional regulator, at 2,471,522 to 2,472,118
SMc01668
SMc01669: SMc01669 - enoyl-CoA hydratase, at 2,472,203 to 2,472,994
SMc01669
Position (kb)
2471
2472 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2470.344 kb on + strand, within SMc01666 at 2470.345 kb on - strand, within SMc01666 at 2470.345 kb on - strand, within SMc01666 at 2470.345 kb on - strand, within SMc01666 at 2470.500 kb on - strand, within SMc01666 at 2470.575 kb on + strand, within SMc01666 at 2470.616 kb on - strand, within SMc01666 at 2470.938 kb on + strand at 2471.105 kb on + strand at 2471.105 kb on + strand at 2471.106 kb on - strand at 2471.164 kb on + strand at 2471.164 kb on + strand at 2471.260 kb on + strand, within SMc01667 at 2471.261 kb on - strand, within SMc01667 at 2471.297 kb on - strand, within SMc01667 at 2471.462 kb on - strand, within SMc01667 at 2471.462 kb on - strand, within SMc01667 at 2471.462 kb on - strand, within SMc01667 at 2471.518 kb on - strand at 2471.599 kb on + strand, within SMc01668 at 2471.600 kb on - strand, within SMc01668 at 2471.600 kb on - strand, within SMc01668 at 2471.602 kb on - strand, within SMc01668 at 2471.949 kb on + strand, within SMc01668 at 2471.986 kb on - strand, within SMc01668 at 2471.989 kb on - strand, within SMc01668 at 2471.989 kb on - strand, within SMc01668 at 2472.061 kb on - strand at 2472.128 kb on - strand at 2472.137 kb on - strand at 2472.167 kb on - strand at 2472.183 kb on + strand at 2472.183 kb on + strand at 2472.183 kb on + strand at 2472.183 kb on + strand at 2472.184 kb on - strand at 2472.184 kb on - strand at 2472.184 kb on - strand at 2472.184 kb on - strand at 2472.287 kb on + strand, within SMc01669 at 2472.287 kb on + strand, within SMc01669 at 2472.309 kb on + strand, within SMc01669
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 2,470,344 + SMc01666 0.56 +0.8 2,470,345 - SMc01666 0.56 +0.7 2,470,345 - SMc01666 0.56 +0.5 2,470,345 - SMc01666 0.56 -0.2 2,470,500 - SMc01666 0.68 +0.6 2,470,575 + SMc01666 0.74 +0.8 2,470,616 - SMc01666 0.77 +1.2 2,470,938 + +0.2 2,471,105 + +1.1 2,471,105 + +0.1 2,471,106 - +0.0 2,471,164 + +1.4 2,471,164 + -0.8 2,471,260 + SMc01667 0.27 -0.6 2,471,261 - SMc01667 0.27 -2.8 2,471,297 - SMc01667 0.37 -0.1 2,471,462 - SMc01667 0.82 -0.6 2,471,462 - SMc01667 0.82 +0.4 2,471,462 - SMc01667 0.82 +0.0 2,471,518 - -1.5 2,471,599 + SMc01668 0.13 +0.7 2,471,600 - SMc01668 0.13 -0.7 2,471,600 - SMc01668 0.13 -0.3 2,471,602 - SMc01668 0.13 +0.7 2,471,949 + SMc01668 0.72 -3.0 2,471,986 - SMc01668 0.78 -0.7 2,471,989 - SMc01668 0.78 +0.8 2,471,989 - SMc01668 0.78 -0.8 2,472,061 - -0.5 2,472,128 - +0.2 2,472,137 - -2.9 2,472,167 - -1.5 2,472,183 + -0.3 2,472,183 + -1.4 2,472,183 + +0.4 2,472,183 + -1.4 2,472,184 - +0.5 2,472,184 - -1.4 2,472,184 - -2.8 2,472,184 - -0.7 2,472,287 + SMc01669 0.11 +0.1 2,472,287 + SMc01669 0.11 +1.1 2,472,309 + SMc01669 0.13 +0.8
Or see this region's nucleotide sequence