Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01633 and SMc01634 overlap by 1 nucleotides SMc01634 and SMc01635 are separated by 4 nucleotides SMc01635 and SMc01636 are separated by 91 nucleotides
SMc01633: SMc01633 - ABC transporter permease, at 2,425,834 to 2,426,700
SMc01633
SMc01634: SMc01634 - ABC transporter permease, at 2,426,700 to 2,427,518
SMc01634
SMc01635: SMc01635 - oxidoreductase, at 2,427,523 to 2,428,284
SMc01635
SMc01636: SMc01636 - transcriptional regulator, at 2,428,376 to 2,429,347
SMc01636
Position (kb)
2426
2427
2428 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2425.869 kb on + strand at 2426.044 kb on - strand, within SMc01633 at 2426.105 kb on - strand, within SMc01633 at 2426.105 kb on - strand, within SMc01633 at 2426.105 kb on - strand, within SMc01633 at 2426.105 kb on - strand, within SMc01633 at 2426.107 kb on + strand, within SMc01633 at 2426.108 kb on - strand, within SMc01633 at 2426.108 kb on - strand, within SMc01633 at 2426.108 kb on - strand, within SMc01633 at 2426.194 kb on - strand, within SMc01633 at 2426.197 kb on + strand, within SMc01633 at 2426.197 kb on + strand, within SMc01633 at 2426.197 kb on + strand, within SMc01633 at 2426.198 kb on - strand, within SMc01633 at 2426.198 kb on - strand, within SMc01633 at 2426.198 kb on - strand, within SMc01633 at 2426.198 kb on - strand, within SMc01633 at 2426.209 kb on + strand, within SMc01633 at 2426.209 kb on + strand at 2426.209 kb on + strand, within SMc01633 at 2426.209 kb on + strand, within SMc01633 at 2426.210 kb on - strand, within SMc01633 at 2426.210 kb on - strand, within SMc01633 at 2426.210 kb on - strand, within SMc01633 at 2426.311 kb on + strand, within SMc01633 at 2426.312 kb on - strand, within SMc01633 at 2426.344 kb on + strand, within SMc01633 at 2426.345 kb on - strand, within SMc01633 at 2426.345 kb on - strand, within SMc01633 at 2426.345 kb on - strand, within SMc01633 at 2426.500 kb on + strand, within SMc01633 at 2426.736 kb on + strand at 2427.232 kb on - strand, within SMc01634 at 2427.232 kb on - strand, within SMc01634 at 2427.232 kb on - strand, within SMc01634 at 2427.232 kb on - strand, within SMc01634 at 2427.232 kb on - strand, within SMc01634 at 2427.381 kb on + strand, within SMc01634 at 2427.382 kb on - strand, within SMc01634 at 2427.460 kb on + strand at 2427.460 kb on + strand at 2427.461 kb on - strand at 2427.464 kb on + strand at 2427.464 kb on + strand at 2427.464 kb on + strand at 2427.961 kb on + strand, within SMc01635 at 2427.962 kb on - strand, within SMc01635 at 2427.982 kb on + strand, within SMc01635 at 2428.037 kb on - strand, within SMc01635 at 2428.045 kb on + strand, within SMc01635 at 2428.144 kb on + strand, within SMc01635 at 2428.144 kb on + strand, within SMc01635 at 2428.144 kb on + strand, within SMc01635 at 2428.145 kb on - strand at 2428.145 kb on - strand, within SMc01635 at 2428.234 kb on + strand at 2428.234 kb on + strand at 2428.234 kb on + strand at 2428.235 kb on - strand at 2428.235 kb on - strand at 2428.484 kb on + strand, within SMc01636
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 2,425,869 + -0.2 2,426,044 - SMc01633 0.24 +0.2 2,426,105 - SMc01633 0.31 +0.5 2,426,105 - SMc01633 0.31 -0.2 2,426,105 - SMc01633 0.31 +0.7 2,426,105 - SMc01633 0.31 -1.0 2,426,107 + SMc01633 0.31 -0.3 2,426,108 - SMc01633 0.32 -1.6 2,426,108 - SMc01633 0.32 -0.2 2,426,108 - SMc01633 0.32 -1.8 2,426,194 - SMc01633 0.42 +0.7 2,426,197 + SMc01633 0.42 -0.2 2,426,197 + SMc01633 0.42 -1.2 2,426,197 + SMc01633 0.42 -1.3 2,426,198 - SMc01633 0.42 -1.3 2,426,198 - SMc01633 0.42 +0.5 2,426,198 - SMc01633 0.42 +0.2 2,426,198 - SMc01633 0.42 +0.3 2,426,209 + SMc01633 0.43 -0.3 2,426,209 + +3.3 2,426,209 + SMc01633 0.43 +0.2 2,426,209 + SMc01633 0.43 -1.4 2,426,210 - SMc01633 0.43 -1.5 2,426,210 - SMc01633 0.43 +1.5 2,426,210 - SMc01633 0.43 -0.4 2,426,311 + SMc01633 0.55 -1.1 2,426,312 - SMc01633 0.55 -1.3 2,426,344 + SMc01633 0.59 -0.1 2,426,345 - SMc01633 0.59 +0.3 2,426,345 - SMc01633 0.59 -1.7 2,426,345 - SMc01633 0.59 +0.4 2,426,500 + SMc01633 0.77 +0.4 2,426,736 + -1.6 2,427,232 - SMc01634 0.65 -0.5 2,427,232 - SMc01634 0.65 +0.3 2,427,232 - SMc01634 0.65 -0.1 2,427,232 - SMc01634 0.65 -0.5 2,427,232 - SMc01634 0.65 -1.0 2,427,381 + SMc01634 0.83 -2.1 2,427,382 - SMc01634 0.83 -0.5 2,427,460 + -2.1 2,427,460 + +0.1 2,427,461 - -1.8 2,427,464 + -0.7 2,427,464 + -0.3 2,427,464 + +1.8 2,427,961 + SMc01635 0.57 +1.4 2,427,962 - SMc01635 0.58 -0.9 2,427,982 + SMc01635 0.60 +0.2 2,428,037 - SMc01635 0.67 -2.1 2,428,045 + SMc01635 0.69 +0.3 2,428,144 + SMc01635 0.81 -2.1 2,428,144 + SMc01635 0.81 +1.3 2,428,144 + SMc01635 0.81 -0.4 2,428,145 - +0.5 2,428,145 - SMc01635 0.82 +0.1 2,428,234 + -0.5 2,428,234 + +1.3 2,428,234 + +0.3 2,428,235 - -0.4 2,428,235 - -1.6 2,428,484 + SMc01636 0.11 +0.4
Or see this region's nucleotide sequence