Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01095 and SMc01094 are separated by 128 nucleotides SMc01094 and SMc01093 are separated by 51 nucleotides
SMc01095: SMc01095 - multidrug-efflux system transmembrane protein, at 461,103 to 464,288
SMc01095
SMc01094: SMc01094 - multidrug efflux system transmembrane protein, at 464,417 to 465,625
SMc01094
SMc01093: SMc01093 - esterase, at 465,677 to 466,492
SMc01093
Position (kb) 464
465
466 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 463.457 kb on - strand, within SMc01095 at 463.777 kb on - strand, within SMc01095 at 463.814 kb on - strand, within SMc01095 at 463.825 kb on + strand, within SMc01095 at 463.825 kb on + strand, within SMc01095 at 463.826 kb on - strand, within SMc01095 at 463.837 kb on + strand, within SMc01095 at 464.053 kb on + strand at 464.053 kb on + strand at 464.053 kb on + strand at 464.054 kb on - strand at 464.137 kb on + strand at 464.341 kb on + strand at 464.392 kb on + strand at 464.392 kb on + strand at 464.392 kb on + strand at 464.392 kb on + strand at 464.393 kb on - strand at 464.481 kb on - strand at 464.943 kb on + strand, within SMc01094 at 464.943 kb on + strand, within SMc01094 at 464.944 kb on - strand, within SMc01094 at 465.066 kb on + strand, within SMc01094 at 465.135 kb on + strand, within SMc01094 at 465.671 kb on + strand at 465.678 kb on + strand at 465.678 kb on + strand at 465.735 kb on - strand at 465.855 kb on + strand, within SMc01093 at 465.855 kb on + strand, within SMc01093 at 465.855 kb on + strand, within SMc01093 at 465.984 kb on + strand, within SMc01093 at 465.984 kb on + strand, within SMc01093 at 465.985 kb on - strand, within SMc01093 at 466.240 kb on - strand, within SMc01093 at 466.555 kb on - strand at 466.555 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 463,457 - SMc01095 0.74 +2.1 463,777 - SMc01095 0.84 -1.9 463,814 - SMc01095 0.85 +0.1 463,825 + SMc01095 0.85 -0.8 463,825 + SMc01095 0.85 -1.6 463,826 - SMc01095 0.85 +1.4 463,837 + SMc01095 0.86 -0.5 464,053 + +0.2 464,053 + +0.1 464,053 + -0.2 464,054 - -2.5 464,137 + -1.2 464,341 + +1.7 464,392 + +0.4 464,392 + +0.3 464,392 + -0.4 464,392 + +0.0 464,393 - -0.7 464,481 - -0.6 464,943 + SMc01094 0.44 +1.4 464,943 + SMc01094 0.44 -3.0 464,944 - SMc01094 0.44 +1.7 465,066 + SMc01094 0.54 +0.1 465,135 + SMc01094 0.59 -0.3 465,671 + -0.3 465,678 + -0.3 465,678 + -0.4 465,735 - -2.2 465,855 + SMc01093 0.22 +1.4 465,855 + SMc01093 0.22 -0.6 465,855 + SMc01093 0.22 -1.9 465,984 + SMc01093 0.38 +1.7 465,984 + SMc01093 0.38 +0.5 465,985 - SMc01093 0.38 -0.8 466,240 - SMc01093 0.69 -2.5 466,555 - +0.7 466,555 - -1.0
Or see this region's nucleotide sequence