Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2311 and SMa2313 overlap by 4 nucleotides SMa2313 and SMa2315 are separated by 131 nucleotides SMa2315 and SMa2317 are separated by 9 nucleotides
SMa2311: SMa2311 - ABC transporter ATP-binding protein, at 1,287,890 to 1,289,116
SMa2311
SMa2313: SMa2313 - Oxidoreductase, at 1,289,113 to 1,291,146
SMa2313
SMa2315: SMa2315 - hypothetical protein, at 1,291,278 to 1,291,817
SMa2315
SMa2317: SMa2317 - hypothetical protein, at 1,291,827 to 1,292,054
SMa2317
Position (kb)
1289
1290
1291
1292 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1288.199 kb on + strand, within SMa2311 at 1288.199 kb on + strand, within SMa2311 at 1288.199 kb on + strand, within SMa2311 at 1288.199 kb on + strand, within SMa2311 at 1288.200 kb on - strand, within SMa2311 at 1288.200 kb on - strand, within SMa2311 at 1288.200 kb on - strand, within SMa2311 at 1288.308 kb on + strand, within SMa2311 at 1288.309 kb on - strand, within SMa2311 at 1288.477 kb on - strand, within SMa2311 at 1288.515 kb on - strand, within SMa2311 at 1288.515 kb on - strand, within SMa2311 at 1288.515 kb on - strand, within SMa2311 at 1288.515 kb on - strand, within SMa2311 at 1288.614 kb on - strand, within SMa2311 at 1288.789 kb on + strand, within SMa2311 at 1288.790 kb on - strand, within SMa2311 at 1288.835 kb on - strand, within SMa2311 at 1288.863 kb on + strand, within SMa2311 at 1288.864 kb on - strand, within SMa2311 at 1288.901 kb on + strand, within SMa2311 at 1288.902 kb on - strand, within SMa2311 at 1288.902 kb on - strand, within SMa2311 at 1289.033 kb on + strand at 1289.033 kb on + strand at 1289.034 kb on - strand at 1289.074 kb on + strand at 1289.104 kb on - strand at 1289.108 kb on - strand at 1289.113 kb on - strand at 1289.485 kb on + strand, within SMa2313 at 1289.485 kb on + strand, within SMa2313 at 1289.485 kb on + strand, within SMa2313 at 1289.486 kb on - strand, within SMa2313 at 1289.491 kb on + strand, within SMa2313 at 1289.491 kb on + strand, within SMa2313 at 1289.491 kb on + strand, within SMa2313 at 1289.492 kb on - strand, within SMa2313 at 1289.645 kb on + strand, within SMa2313 at 1289.663 kb on - strand, within SMa2313 at 1289.686 kb on - strand, within SMa2313 at 1289.914 kb on - strand, within SMa2313 at 1289.914 kb on - strand, within SMa2313 at 1289.998 kb on + strand, within SMa2313 at 1289.998 kb on + strand, within SMa2313 at 1289.999 kb on - strand, within SMa2313 at 1290.081 kb on + strand, within SMa2313 at 1290.081 kb on + strand, within SMa2313 at 1290.082 kb on - strand, within SMa2313 at 1290.093 kb on + strand, within SMa2313 at 1290.137 kb on - strand, within SMa2313 at 1290.302 kb on + strand, within SMa2313 at 1290.534 kb on + strand, within SMa2313 at 1290.980 kb on + strand at 1290.992 kb on - strand at 1290.992 kb on - strand at 1290.992 kb on - strand at 1291.080 kb on + strand at 1291.265 kb on + strand at 1291.365 kb on + strand, within SMa2315 at 1291.559 kb on + strand, within SMa2315 at 1291.600 kb on - strand, within SMa2315 at 1291.600 kb on - strand, within SMa2315 at 1291.652 kb on - strand, within SMa2315 at 1291.667 kb on + strand, within SMa2315 at 1291.789 kb on + strand at 1291.805 kb on - strand at 1291.805 kb on - strand at 1291.853 kb on + strand, within SMa2317 at 1291.853 kb on + strand, within SMa2317 at 1291.853 kb on + strand, within SMa2317 at 1291.853 kb on + strand, within SMa2317 at 1291.960 kb on - strand, within SMa2317 at 1291.960 kb on - strand, within SMa2317 at 1292.041 kb on + strand at 1292.094 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,288,199 + SMa2311 0.25 -0.1 1,288,199 + SMa2311 0.25 +0.4 1,288,199 + SMa2311 0.25 +0.9 1,288,199 + SMa2311 0.25 -2.3 1,288,200 - SMa2311 0.25 +0.4 1,288,200 - SMa2311 0.25 -1.8 1,288,200 - SMa2311 0.25 -1.7 1,288,308 + SMa2311 0.34 +0.3 1,288,309 - SMa2311 0.34 +0.4 1,288,477 - SMa2311 0.48 -0.8 1,288,515 - SMa2311 0.51 +0.3 1,288,515 - SMa2311 0.51 -0.1 1,288,515 - SMa2311 0.51 -0.8 1,288,515 - SMa2311 0.51 -0.0 1,288,614 - SMa2311 0.59 +0.0 1,288,789 + SMa2311 0.73 -0.5 1,288,790 - SMa2311 0.73 +0.5 1,288,835 - SMa2311 0.77 -0.4 1,288,863 + SMa2311 0.79 +0.3 1,288,864 - SMa2311 0.79 -0.4 1,288,901 + SMa2311 0.82 +0.3 1,288,902 - SMa2311 0.82 +0.8 1,288,902 - SMa2311 0.82 -1.2 1,289,033 + +0.1 1,289,033 + +0.4 1,289,034 - -0.6 1,289,074 + +0.5 1,289,104 - +0.0 1,289,108 - -0.4 1,289,113 - +0.5 1,289,485 + SMa2313 0.18 -1.4 1,289,485 + SMa2313 0.18 -0.7 1,289,485 + SMa2313 0.18 +0.0 1,289,486 - SMa2313 0.18 -1.1 1,289,491 + SMa2313 0.19 -0.9 1,289,491 + SMa2313 0.19 -3.1 1,289,491 + SMa2313 0.19 -1.1 1,289,492 - SMa2313 0.19 -1.0 1,289,645 + SMa2313 0.26 +0.5 1,289,663 - SMa2313 0.27 -2.0 1,289,686 - SMa2313 0.28 -0.9 1,289,914 - SMa2313 0.39 -1.1 1,289,914 - SMa2313 0.39 -1.3 1,289,998 + SMa2313 0.44 -3.1 1,289,998 + SMa2313 0.44 -1.5 1,289,999 - SMa2313 0.44 +2.1 1,290,081 + SMa2313 0.48 -1.0 1,290,081 + SMa2313 0.48 -0.1 1,290,082 - SMa2313 0.48 -2.1 1,290,093 + SMa2313 0.48 -1.4 1,290,137 - SMa2313 0.50 -1.6 1,290,302 + SMa2313 0.58 +0.6 1,290,534 + SMa2313 0.70 -2.6 1,290,980 + +0.5 1,290,992 - +0.7 1,290,992 - -0.3 1,290,992 - -0.2 1,291,080 + -0.2 1,291,265 + -0.5 1,291,365 + SMa2315 0.16 -1.1 1,291,559 + SMa2315 0.52 -0.1 1,291,600 - SMa2315 0.60 +0.2 1,291,600 - SMa2315 0.60 +0.5 1,291,652 - SMa2315 0.69 -0.3 1,291,667 + SMa2315 0.72 -0.1 1,291,789 + -1.8 1,291,805 - -1.6 1,291,805 - -0.3 1,291,853 + SMa2317 0.11 -0.2 1,291,853 + SMa2317 0.11 -0.1 1,291,853 + SMa2317 0.11 -0.4 1,291,853 + SMa2317 0.11 +0.0 1,291,960 - SMa2317 0.58 -1.1 1,291,960 - SMa2317 0.58 -3.4 1,292,041 + -0.3 1,292,094 - -1.1
Or see this region's nucleotide sequence