Strain Fitness in Sinorhizobium meliloti 1021 around SMa1808
Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,024,978 | + | -1.8 | |||
1,025,339 | - | -0.7 | |||
1,025,339 | - | -2.3 | |||
1,025,386 | - | -0.8 | |||
1,025,386 | - | -1.9 | |||
1,025,398 | + | +0.2 | |||
1,025,505 | + | +3.5 | |||
1,025,604 | + | -0.7 | |||
1,025,610 | + | -0.2 | |||
1,025,611 | - | +0.1 | |||
1,025,611 | - | -0.2 | |||
1,025,647 | + | -1.4 | |||
1,025,648 | - | +0.2 | |||
1,025,648 | - | +1.0 | |||
1,025,651 | + | -2.0 | |||
1,025,651 | + | -0.8 | |||
1,025,652 | - | -0.8 | |||
1,025,652 | - | -0.1 | |||
1,025,652 | - | -2.1 | |||
1,025,652 | - | +0.0 | |||
1,025,708 | + | SMa1808 | 0.15 | +0.3 | |
1,025,709 | - | SMa1808 | 0.16 | +0.4 | |
1,025,773 | + | SMa1808 | 0.31 | +0.7 | |
1,025,774 | - | SMa1808 | 0.32 | +3.3 | |
1,025,826 | + | SMa1808 | 0.44 | -0.4 | |
1,025,827 | - | SMa1808 | 0.45 | +0.8 | |
1,025,841 | - | SMa1808 | 0.48 | +0.5 | |
1,026,070 | - | -1.1 | |||
1,026,122 | + | -0.2 | |||
1,026,122 | + | -0.4 | |||
1,026,399 | + | SMa1809 | 0.40 | -0.7 | |
1,026,400 | - | SMa1809 | 0.40 | +0.0 | |
1,026,400 | - | SMa1809 | 0.40 | +0.0 | |
1,026,582 | + | SMa1809 | 0.62 | -1.6 | |
1,026,675 | + | SMa1809 | 0.73 | +1.1 | |
1,026,853 | - | +0.5 | |||
1,026,929 | + | -0.6 | |||
1,027,000 | + | +1.1 | |||
1,027,001 | - | +1.1 |
Or see this region's nucleotide sequence