Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1455 and SMa1456 overlap by 4 nucleotides SMa1456 and SMa1459 are separated by 107 nucleotides SMa1459 and SMa1461 overlap by 4 nucleotides
SMa1454: SMa1454 - AraC family transcriptional regulator, at 801,299 to 802,342
SMa1454
SMa1455: SMa1455 - hypothetical protein, at 802,324 to 802,842
SMa1455
SMa1456: SMa1456 - hypothetical protein, at 802,839 to 803,228
SMa1456
SMa1459: SMa1459 - Dehydrogenase, malate/L-lactate family, at 803,336 to 804,340
SMa1459
SMa1461: SMa1461 - muconate cycloisomerase, at 804,337 to 805,461
SMa1461
Position (kb) 803
804
805 Strain fitness (log2 ratio) -2
-1
0
1
2 at 802.347 kb on + strand at 802.370 kb on + strand at 802.370 kb on + strand at 802.371 kb on - strand at 802.371 kb on - strand at 802.371 kb on - strand at 802.637 kb on + strand, within SMa1455 at 802.637 kb on + strand, within SMa1455 at 802.638 kb on - strand, within SMa1455 at 802.722 kb on - strand, within SMa1455 at 803.176 kb on + strand, within SMa1456 at 803.176 kb on + strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.229 kb on - strand at 803.250 kb on + strand at 803.338 kb on - strand at 803.645 kb on - strand, within SMa1459 at 803.846 kb on + strand, within SMa1459 at 803.939 kb on - strand, within SMa1459 at 803.989 kb on + strand, within SMa1459 at 803.989 kb on + strand, within SMa1459 at 803.991 kb on + strand, within SMa1459 at 803.991 kb on + strand, within SMa1459 at 803.992 kb on - strand, within SMa1459 at 803.992 kb on - strand, within SMa1459 at 803.992 kb on - strand, within SMa1459 at 804.190 kb on - strand, within SMa1459 at 804.190 kb on - strand, within SMa1459 at 804.192 kb on + strand, within SMa1459 at 804.192 kb on + strand, within SMa1459 at 804.532 kb on - strand, within SMa1461 at 804.691 kb on + strand, within SMa1461 at 804.821 kb on + strand, within SMa1461 at 804.969 kb on - strand, within SMa1461 at 804.969 kb on - strand, within SMa1461 at 805.046 kb on + strand, within SMa1461 at 805.047 kb on - strand, within SMa1461 at 805.052 kb on + strand, within SMa1461 at 805.132 kb on - strand, within SMa1461 at 805.132 kb on - strand, within SMa1461 at 805.177 kb on - strand, within SMa1461 at 805.196 kb on + strand, within SMa1461 at 805.196 kb on + strand, within SMa1461 at 805.197 kb on - strand, within SMa1461
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 802,347 + +0.0 802,370 + -0.4 802,370 + +0.6 802,371 - +0.6 802,371 - +1.0 802,371 - +0.1 802,637 + SMa1455 0.60 +0.3 802,637 + SMa1455 0.60 +1.0 802,638 - SMa1455 0.61 -0.3 802,722 - SMa1455 0.77 -1.3 803,176 + SMa1456 0.86 +0.8 803,176 + SMa1456 0.86 -0.6 803,177 - SMa1456 0.87 -0.0 803,177 - SMa1456 0.87 +0.2 803,177 - SMa1456 0.87 -2.7 803,177 - SMa1456 0.87 +0.3 803,229 - -0.2 803,250 + +1.1 803,338 - -2.3 803,645 - SMa1459 0.31 +0.5 803,846 + SMa1459 0.51 +0.7 803,939 - SMa1459 0.60 +0.1 803,989 + SMa1459 0.65 +0.1 803,989 + SMa1459 0.65 +0.5 803,991 + SMa1459 0.65 +0.4 803,991 + SMa1459 0.65 +1.5 803,992 - SMa1459 0.65 -0.8 803,992 - SMa1459 0.65 -0.2 803,992 - SMa1459 0.65 +1.8 804,190 - SMa1459 0.85 +0.1 804,190 - SMa1459 0.85 -2.2 804,192 + SMa1459 0.85 +0.6 804,192 + SMa1459 0.85 -1.8 804,532 - SMa1461 0.17 -0.0 804,691 + SMa1461 0.31 +0.1 804,821 + SMa1461 0.43 +0.6 804,969 - SMa1461 0.56 -0.4 804,969 - SMa1461 0.56 -0.2 805,046 + SMa1461 0.63 -1.4 805,047 - SMa1461 0.63 +0.4 805,052 + SMa1461 0.64 +0.3 805,132 - SMa1461 0.71 +0.4 805,132 - SMa1461 0.71 -0.7 805,177 - SMa1461 0.75 +0.1 805,196 + SMa1461 0.76 -0.1 805,196 + SMa1461 0.76 -0.8 805,197 - SMa1461 0.76 +0.1
Or see this region's nucleotide sequence