Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1417 and SMa1418 are separated by 18 nucleotides SMa1418 and SMa1421 are separated by 7 nucleotides
SMa1417: SMa1417 - Dehydrogenase, Zn-dependent, at 780,875 to 781,900
SMa1417
SMa1418: SMa1418 - ABC transporter permease, at 781,919 to 782,860
SMa1418
SMa1421: SMa1421 - ABC transporter ATP-binding protein, at 782,868 to 784,379
SMa1421
Position (kb) 781
782
783 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 780.961 kb on - strand at 781.077 kb on - strand, within SMa1417 at 781.088 kb on + strand, within SMa1417 at 781.121 kb on - strand, within SMa1417 at 781.271 kb on + strand, within SMa1417 at 781.515 kb on - strand, within SMa1417 at 781.515 kb on - strand, within SMa1417 at 781.542 kb on + strand, within SMa1417 at 781.542 kb on + strand, within SMa1417 at 781.543 kb on - strand, within SMa1417 at 781.759 kb on - strand, within SMa1417 at 781.772 kb on + strand, within SMa1417 at 781.772 kb on + strand, within SMa1417 at 781.773 kb on - strand, within SMa1417 at 781.773 kb on - strand, within SMa1417 at 781.793 kb on + strand, within SMa1417 at 781.794 kb on - strand, within SMa1417 at 781.794 kb on - strand, within SMa1417 at 781.921 kb on - strand at 782.240 kb on + strand, within SMa1418 at 782.240 kb on + strand, within SMa1418 at 782.247 kb on + strand, within SMa1418 at 782.532 kb on + strand, within SMa1418 at 782.550 kb on + strand, within SMa1418 at 782.550 kb on + strand, within SMa1418 at 782.689 kb on + strand, within SMa1418 at 782.691 kb on + strand, within SMa1418 at 782.691 kb on + strand, within SMa1418 at 782.692 kb on - strand, within SMa1418 at 782.852 kb on + strand at 782.852 kb on + strand at 782.853 kb on - strand at 782.853 kb on - strand at 782.863 kb on + strand at 782.863 kb on + strand at 782.863 kb on + strand at 782.878 kb on + strand at 782.878 kb on + strand at 782.879 kb on - strand at 782.893 kb on + strand at 782.894 kb on - strand at 782.894 kb on - strand at 782.894 kb on - strand at 782.966 kb on + strand at 782.966 kb on + strand at 783.397 kb on + strand, within SMa1421 at 783.397 kb on + strand, within SMa1421 at 783.398 kb on - strand, within SMa1421 at 783.398 kb on - strand, within SMa1421 at 783.457 kb on + strand, within SMa1421 at 783.457 kb on + strand, within SMa1421 at 783.457 kb on + strand, within SMa1421 at 783.458 kb on - strand, within SMa1421 at 783.458 kb on - strand, within SMa1421 at 783.542 kb on + strand, within SMa1421 at 783.543 kb on - strand, within SMa1421 at 783.604 kb on + strand, within SMa1421 at 783.606 kb on - strand, within SMa1421 at 783.631 kb on + strand, within SMa1421 at 783.632 kb on - strand, within SMa1421 at 783.632 kb on - strand, within SMa1421 at 783.633 kb on + strand, within SMa1421 at 783.740 kb on - strand, within SMa1421 at 783.740 kb on - strand, within SMa1421 at 783.789 kb on + strand, within SMa1421
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 780,961 - -0.8 781,077 - SMa1417 0.20 +0.4 781,088 + SMa1417 0.21 +1.2 781,121 - SMa1417 0.24 -0.1 781,271 + SMa1417 0.39 +1.0 781,515 - SMa1417 0.62 +0.0 781,515 - SMa1417 0.62 +0.6 781,542 + SMa1417 0.65 -1.2 781,542 + SMa1417 0.65 -0.2 781,543 - SMa1417 0.65 -1.2 781,759 - SMa1417 0.86 -0.5 781,772 + SMa1417 0.87 +1.1 781,772 + SMa1417 0.87 -0.0 781,773 - SMa1417 0.88 +1.1 781,773 - SMa1417 0.88 -0.9 781,793 + SMa1417 0.89 -0.0 781,794 - SMa1417 0.90 +0.6 781,794 - SMa1417 0.90 -0.1 781,921 - -0.3 782,240 + SMa1418 0.34 -0.2 782,240 + SMa1418 0.34 -0.2 782,247 + SMa1418 0.35 +0.1 782,532 + SMa1418 0.65 -2.0 782,550 + SMa1418 0.67 -0.9 782,550 + SMa1418 0.67 -1.8 782,689 + SMa1418 0.82 -0.0 782,691 + SMa1418 0.82 -0.3 782,691 + SMa1418 0.82 -0.0 782,692 - SMa1418 0.82 -0.7 782,852 + -0.3 782,852 + -3.2 782,853 - -1.1 782,853 - -0.4 782,863 + -1.2 782,863 + -2.9 782,863 + -0.4 782,878 + +0.8 782,878 + -0.5 782,879 - -0.5 782,893 + -0.1 782,894 - -0.6 782,894 - +1.1 782,894 - +0.2 782,966 + +0.1 782,966 + -0.2 783,397 + SMa1421 0.35 -0.7 783,397 + SMa1421 0.35 +0.6 783,398 - SMa1421 0.35 -0.3 783,398 - SMa1421 0.35 -0.7 783,457 + SMa1421 0.39 +0.2 783,457 + SMa1421 0.39 -3.0 783,457 + SMa1421 0.39 -1.3 783,458 - SMa1421 0.39 -0.4 783,458 - SMa1421 0.39 -0.2 783,542 + SMa1421 0.45 -0.8 783,543 - SMa1421 0.45 +0.3 783,604 + SMa1421 0.49 +0.3 783,606 - SMa1421 0.49 -0.6 783,631 + SMa1421 0.50 -0.7 783,632 - SMa1421 0.51 +0.5 783,632 - SMa1421 0.51 -0.4 783,633 + SMa1421 0.51 -0.4 783,740 - SMa1421 0.58 -0.2 783,740 - SMa1421 0.58 +2.8 783,789 + SMa1421 0.61 +1.0
Or see this region's nucleotide sequence