Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1374 and SMa1373 overlap by 1 nucleotides SMa1373 and SMa1375 are separated by 78 nucleotides SMa1375 and SMa1377 are separated by 29 nucleotides
SMa1374: SMa1374 - ABC transporter permease, at 754,635 to 755,594
SMa1374
SMa1373: SMa1373 - ABC transporter permease, at 755,594 to 756,514
SMa1373
SMa1375: SMa1375 - ABC transporter substrate-binding protein, at 756,593 to 758,077
SMa1375
SMa1377: SMa1377 - amidase, at 758,107 to 759,522
SMa1377
Position (kb) 756
757
758
759 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 755.819 kb on - strand, within SMa1373 at 755.819 kb on - strand, within SMa1373 at 755.846 kb on + strand, within SMa1373 at 755.851 kb on + strand, within SMa1373 at 755.852 kb on - strand, within SMa1373 at 755.866 kb on + strand, within SMa1373 at 755.866 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.908 kb on - strand, within SMa1373 at 755.983 kb on + strand, within SMa1373 at 755.984 kb on - strand, within SMa1373 at 756.514 kb on + strand at 756.514 kb on + strand at 756.514 kb on + strand at 756.514 kb on + strand at 756.515 kb on - strand at 756.515 kb on - strand at 756.573 kb on + strand at 756.574 kb on - strand at 756.574 kb on - strand at 756.595 kb on - strand at 756.602 kb on + strand at 756.672 kb on + strand at 756.672 kb on + strand at 756.672 kb on + strand at 756.705 kb on + strand at 756.705 kb on + strand at 756.706 kb on - strand at 756.706 kb on - strand at 756.706 kb on - strand at 757.126 kb on - strand, within SMa1375 at 757.126 kb on - strand, within SMa1375 at 757.195 kb on - strand, within SMa1375 at 757.195 kb on - strand, within SMa1375 at 757.273 kb on + strand, within SMa1375 at 757.274 kb on - strand, within SMa1375 at 757.530 kb on + strand, within SMa1375 at 757.531 kb on - strand, within SMa1375 at 757.531 kb on - strand, within SMa1375 at 757.605 kb on + strand, within SMa1375 at 757.605 kb on + strand, within SMa1375 at 757.606 kb on - strand, within SMa1375 at 757.691 kb on - strand, within SMa1375 at 757.698 kb on + strand, within SMa1375 at 757.698 kb on + strand, within SMa1375 at 757.699 kb on - strand, within SMa1375 at 757.905 kb on + strand, within SMa1375 at 757.905 kb on + strand, within SMa1375 at 757.906 kb on - strand, within SMa1375 at 757.906 kb on - strand, within SMa1375 at 757.946 kb on - strand at 757.946 kb on - strand at 758.067 kb on - strand at 758.105 kb on + strand at 758.106 kb on - strand at 758.106 kb on - strand at 758.106 kb on - strand at 758.131 kb on + strand at 758.132 kb on - strand at 758.333 kb on + strand, within SMa1377 at 758.333 kb on + strand, within SMa1377 at 758.334 kb on - strand, within SMa1377 at 758.372 kb on + strand, within SMa1377 at 758.372 kb on + strand, within SMa1377 at 758.372 kb on + strand, within SMa1377 at 758.373 kb on - strand, within SMa1377 at 758.373 kb on - strand, within SMa1377 at 758.449 kb on - strand, within SMa1377 at 758.516 kb on - strand, within SMa1377 at 758.516 kb on - strand, within SMa1377 at 758.737 kb on + strand, within SMa1377 at 758.738 kb on - strand, within SMa1377 at 758.791 kb on + strand, within SMa1377 at 758.932 kb on - strand, within SMa1377
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 755,819 - SMa1373 0.24 -1.9 755,819 - SMa1373 0.24 -2.6 755,846 + SMa1373 0.27 +0.5 755,851 + SMa1373 0.28 -0.7 755,852 - SMa1373 0.28 -0.3 755,866 + SMa1373 0.30 +0.5 755,866 + SMa1373 0.30 +0.4 755,907 + SMa1373 0.34 +0.5 755,907 + SMa1373 0.34 +1.4 755,907 + SMa1373 0.34 +0.7 755,908 - SMa1373 0.34 -1.3 755,983 + SMa1373 0.42 -1.5 755,984 - SMa1373 0.42 -0.3 756,514 + -0.5 756,514 + +1.3 756,514 + -0.0 756,514 + -0.9 756,515 - +0.3 756,515 - -1.2 756,573 + -0.3 756,574 - +0.0 756,574 - -0.3 756,595 - -2.8 756,602 + +0.3 756,672 + +1.2 756,672 + -0.5 756,672 + -2.7 756,705 + -1.1 756,705 + -0.3 756,706 - -3.1 756,706 - -0.5 756,706 - -0.3 757,126 - SMa1375 0.36 +0.1 757,126 - SMa1375 0.36 +0.6 757,195 - SMa1375 0.41 +0.3 757,195 - SMa1375 0.41 -0.5 757,273 + SMa1375 0.46 +0.1 757,274 - SMa1375 0.46 -0.5 757,530 + SMa1375 0.63 -0.3 757,531 - SMa1375 0.63 -0.1 757,531 - SMa1375 0.63 -1.7 757,605 + SMa1375 0.68 -0.3 757,605 + SMa1375 0.68 -0.1 757,606 - SMa1375 0.68 -1.1 757,691 - SMa1375 0.74 -0.6 757,698 + SMa1375 0.74 -0.2 757,698 + SMa1375 0.74 -1.1 757,699 - SMa1375 0.74 +0.9 757,905 + SMa1375 0.88 -0.2 757,905 + SMa1375 0.88 +0.3 757,906 - SMa1375 0.88 -0.5 757,906 - SMa1375 0.88 -0.6 757,946 - -2.7 757,946 - -1.6 758,067 - +2.4 758,105 + -0.6 758,106 - +0.2 758,106 - -0.3 758,106 - -0.9 758,131 + -0.6 758,132 - -1.0 758,333 + SMa1377 0.16 +0.3 758,333 + SMa1377 0.16 +0.3 758,334 - SMa1377 0.16 +0.4 758,372 + SMa1377 0.19 +1.0 758,372 + SMa1377 0.19 -0.2 758,372 + SMa1377 0.19 -0.4 758,373 - SMa1377 0.19 +1.1 758,373 - SMa1377 0.19 +0.3 758,449 - SMa1377 0.24 -0.2 758,516 - SMa1377 0.29 +0.5 758,516 - SMa1377 0.29 +0.4 758,737 + SMa1377 0.44 +2.0 758,738 - SMa1377 0.45 -2.6 758,791 + SMa1377 0.48 -0.4 758,932 - SMa1377 0.58 -1.7
Or see this region's nucleotide sequence