Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1013 and SMa1014 are separated by 85 nucleotides SMa1014 and SMa1016 are separated by 4 nucleotides SMa1016 and SMa1017 are separated by 142 nucleotides SMa1017 and SMa1018 overlap by 4 nucleotides SMa1018 and SMa1021 are separated by 180 nucleotides
SMa1013: SMa1013 - ATPase P, at 560,686 to 563,166
SMa1013
SMa1014: SMa1014 - HmrR, at 563,252 to 563,668
SMa1014
SMa1016: SMa1016 - acyltransferase, at 563,673 to 564,947
SMa1016
SMa1017: SMa1017 - hypothetical protein, at 565,090 to 565,296
SMa1017
SMa1018: SMa1018 - hypothetical protein, at 565,293 to 565,655
SMa1018
SMa1021: SMa1021 - hypothetical protein, at 565,836 to 566,402
SMa1021
Position (kb) 563
564
565 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 563.015 kb on - strand at 563.053 kb on + strand at 563.131 kb on - strand at 563.227 kb on + strand at 563.227 kb on + strand at 563.227 kb on + strand at 563.228 kb on - strand at 563.233 kb on + strand at 563.234 kb on - strand at 563.235 kb on + strand at 563.285 kb on + strand at 563.521 kb on - strand, within SMa1014 at 563.732 kb on + strand at 563.733 kb on - strand at 563.733 kb on - strand at 563.733 kb on - strand at 563.736 kb on + strand at 563.754 kb on + strand at 563.800 kb on + strand at 563.884 kb on + strand, within SMa1016 at 563.884 kb on + strand, within SMa1016 at 563.884 kb on + strand, within SMa1016 at 563.892 kb on - strand, within SMa1016 at 563.893 kb on + strand, within SMa1016 at 563.894 kb on - strand, within SMa1016 at 563.945 kb on + strand, within SMa1016 at 563.945 kb on + strand, within SMa1016 at 563.945 kb on + strand, within SMa1016 at 563.945 kb on + strand, within SMa1016 at 563.945 kb on + strand, within SMa1016 at 563.946 kb on - strand, within SMa1016 at 563.963 kb on + strand, within SMa1016 at 564.198 kb on + strand, within SMa1016 at 564.199 kb on - strand, within SMa1016 at 564.221 kb on - strand, within SMa1016 at 564.221 kb on - strand, within SMa1016 at 564.232 kb on + strand, within SMa1016 at 564.233 kb on - strand, within SMa1016 at 564.233 kb on - strand, within SMa1016 at 564.248 kb on - strand, within SMa1016 at 564.285 kb on + strand, within SMa1016 at 564.565 kb on + strand, within SMa1016 at 564.600 kb on - strand, within SMa1016 at 564.620 kb on - strand, within SMa1016 at 564.636 kb on + strand, within SMa1016 at 564.637 kb on - strand, within SMa1016 at 564.637 kb on - strand, within SMa1016 at 564.775 kb on - strand, within SMa1016 at 564.877 kb on + strand at 564.886 kb on + strand at 564.887 kb on - strand at 564.887 kb on - strand at 564.951 kb on + strand at 564.955 kb on + strand at 564.973 kb on + strand at 564.974 kb on - strand at 565.067 kb on - strand at 565.094 kb on + strand at 565.094 kb on + strand at 565.095 kb on - strand at 565.095 kb on - strand at 565.135 kb on + strand, within SMa1017 at 565.136 kb on - strand, within SMa1017 at 565.339 kb on + strand, within SMa1018 at 565.339 kb on + strand, within SMa1018 at 565.340 kb on - strand, within SMa1018 at 565.340 kb on - strand, within SMa1018 at 565.340 kb on - strand, within SMa1018 at 565.340 kb on - strand, within SMa1018 at 565.340 kb on - strand, within SMa1018 at 565.554 kb on + strand, within SMa1018 at 565.752 kb on + strand at 565.752 kb on + strand at 565.776 kb on + strand at 565.818 kb on + strand at 565.874 kb on + strand at 565.875 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 563,015 - -0.4 563,053 + -1.9 563,131 - +0.9 563,227 + -0.4 563,227 + +1.5 563,227 + -0.4 563,228 - -3.1 563,233 + -2.7 563,234 - -0.5 563,235 + -0.4 563,285 + +0.4 563,521 - SMa1014 0.65 -2.7 563,732 + -0.1 563,733 - -1.4 563,733 - -0.7 563,733 - +0.2 563,736 + +0.5 563,754 + -0.2 563,800 + -1.6 563,884 + SMa1016 0.17 -0.2 563,884 + SMa1016 0.17 -1.0 563,884 + SMa1016 0.17 +1.0 563,892 - SMa1016 0.17 -0.2 563,893 + SMa1016 0.17 -1.4 563,894 - SMa1016 0.17 -0.0 563,945 + SMa1016 0.21 -0.5 563,945 + SMa1016 0.21 -3.0 563,945 + SMa1016 0.21 +1.9 563,945 + SMa1016 0.21 -1.0 563,945 + SMa1016 0.21 -0.3 563,946 - SMa1016 0.21 -0.5 563,963 + SMa1016 0.23 +0.2 564,198 + SMa1016 0.41 -0.4 564,199 - SMa1016 0.41 -0.3 564,221 - SMa1016 0.43 -0.6 564,221 - SMa1016 0.43 -0.3 564,232 + SMa1016 0.44 -0.2 564,233 - SMa1016 0.44 -0.4 564,233 - SMa1016 0.44 +0.0 564,248 - SMa1016 0.45 -0.1 564,285 + SMa1016 0.48 +0.2 564,565 + SMa1016 0.70 +0.4 564,600 - SMa1016 0.73 -0.3 564,620 - SMa1016 0.74 -3.8 564,636 + SMa1016 0.76 -3.1 564,637 - SMa1016 0.76 +0.9 564,637 - SMa1016 0.76 +1.1 564,775 - SMa1016 0.86 -1.7 564,877 + -0.5 564,886 + -0.3 564,887 - -1.0 564,887 - -0.2 564,951 + -0.4 564,955 + +0.4 564,973 + +0.1 564,974 - +0.1 565,067 - -0.0 565,094 + -1.3 565,094 + -0.5 565,095 - -0.2 565,095 - -0.4 565,135 + SMa1017 0.22 -0.1 565,136 - SMa1017 0.22 +1.0 565,339 + SMa1018 0.13 -0.2 565,339 + SMa1018 0.13 -0.7 565,340 - SMa1018 0.13 +0.2 565,340 - SMa1018 0.13 +0.3 565,340 - SMa1018 0.13 -1.8 565,340 - SMa1018 0.13 -0.1 565,340 - SMa1018 0.13 +0.6 565,554 + SMa1018 0.72 -0.0 565,752 + -0.0 565,752 + +1.6 565,776 + -1.5 565,818 + +0.9 565,874 + +0.5 565,875 - +0.5
Or see this region's nucleotide sequence