Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0799 and SMa0800 are separated by 92 nucleotides SMa0800 and SMa0802 are separated by 1 nucleotides SMa0802 and SMa0803 overlap by 4 nucleotides
SMa0799: SMa0799 - ABC transporter substrate-binding protein, at 435,861 to 436,871
SMa0799
SMa0800: SMa0800 - ABC transporter permease, at 436,964 to 437,839
SMa0800
SMa0802: SMa0802 - ABC transporter permease, at 437,841 to 438,641
SMa0802
SMa0803: SMa0803 - ABC transporter ATP-binding protein, at 438,638 to 439,717
SMa0803
Position (kb) 437
438
439 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 436.968 kb on + strand at 436.969 kb on - strand at 437.000 kb on + strand at 437.056 kb on - strand, within SMa0800 at 437.101 kb on - strand, within SMa0800 at 437.142 kb on - strand, within SMa0800 at 437.142 kb on - strand, within SMa0800 at 437.340 kb on - strand, within SMa0800 at 437.462 kb on + strand, within SMa0800 at 437.462 kb on + strand, within SMa0800 at 437.462 kb on + strand, within SMa0800 at 437.463 kb on - strand, within SMa0800 at 437.463 kb on - strand, within SMa0800 at 437.463 kb on - strand, within SMa0800 at 437.463 kb on - strand, within SMa0800 at 437.463 kb on - strand, within SMa0800 at 437.463 kb on - strand, within SMa0800 at 437.495 kb on + strand, within SMa0800 at 437.495 kb on + strand, within SMa0800 at 437.496 kb on - strand, within SMa0800 at 437.496 kb on - strand, within SMa0800 at 437.678 kb on - strand, within SMa0800 at 437.789 kb on + strand at 437.932 kb on + strand, within SMa0802 at 437.933 kb on - strand, within SMa0802 at 437.933 kb on - strand, within SMa0802 at 437.938 kb on + strand, within SMa0802 at 437.945 kb on - strand, within SMa0802 at 438.006 kb on + strand, within SMa0802 at 438.016 kb on + strand, within SMa0802 at 438.016 kb on + strand, within SMa0802 at 438.017 kb on - strand, within SMa0802 at 438.077 kb on + strand, within SMa0802 at 438.200 kb on - strand at 438.213 kb on + strand, within SMa0802 at 438.213 kb on + strand, within SMa0802 at 438.214 kb on - strand, within SMa0802 at 438.643 kb on + strand at 438.644 kb on - strand at 438.680 kb on + strand at 438.710 kb on - strand at 438.782 kb on + strand, within SMa0803 at 438.782 kb on + strand, within SMa0803 at 438.782 kb on + strand, within SMa0803 at 438.828 kb on + strand, within SMa0803 at 438.828 kb on + strand, within SMa0803 at 438.829 kb on - strand, within SMa0803 at 438.829 kb on - strand, within SMa0803 at 438.872 kb on - strand, within SMa0803 at 439.031 kb on - strand, within SMa0803 at 439.092 kb on - strand, within SMa0803 at 439.092 kb on - strand, within SMa0803 at 439.208 kb on + strand, within SMa0803 at 439.208 kb on + strand, within SMa0803 at 439.305 kb on + strand, within SMa0803 at 439.305 kb on + strand, within SMa0803 at 439.308 kb on - strand, within SMa0803 at 439.382 kb on - strand, within SMa0803 at 439.481 kb on - strand, within SMa0803 at 439.481 kb on - strand, within SMa0803 at 439.481 kb on - strand, within SMa0803 at 439.487 kb on - strand, within SMa0803 at 439.487 kb on - strand, within SMa0803
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 436,968 + +1.2 436,969 - +2.0 437,000 + -0.2 437,056 - SMa0800 0.11 -0.2 437,101 - SMa0800 0.16 -0.5 437,142 - SMa0800 0.20 +0.4 437,142 - SMa0800 0.20 +0.4 437,340 - SMa0800 0.43 -0.1 437,462 + SMa0800 0.57 -0.1 437,462 + SMa0800 0.57 +0.2 437,462 + SMa0800 0.57 +0.2 437,463 - SMa0800 0.57 +0.2 437,463 - SMa0800 0.57 -1.5 437,463 - SMa0800 0.57 +1.5 437,463 - SMa0800 0.57 +0.3 437,463 - SMa0800 0.57 +0.3 437,463 - SMa0800 0.57 +0.2 437,495 + SMa0800 0.61 -0.3 437,495 + SMa0800 0.61 +0.4 437,496 - SMa0800 0.61 -0.9 437,496 - SMa0800 0.61 -0.6 437,678 - SMa0800 0.82 -0.4 437,789 + +0.2 437,932 + SMa0802 0.11 -0.9 437,933 - SMa0802 0.11 +0.0 437,933 - SMa0802 0.11 -1.1 437,938 + SMa0802 0.12 -0.3 437,945 - SMa0802 0.13 -2.5 438,006 + SMa0802 0.21 -1.2 438,016 + SMa0802 0.22 -1.4 438,016 + SMa0802 0.22 -1.2 438,017 - SMa0802 0.22 +0.2 438,077 + SMa0802 0.29 +0.3 438,200 - +0.0 438,213 + SMa0802 0.46 -0.2 438,213 + SMa0802 0.46 +0.5 438,214 - SMa0802 0.47 +0.7 438,643 + +0.0 438,644 - -0.8 438,680 + +0.5 438,710 - +0.3 438,782 + SMa0803 0.13 +1.0 438,782 + SMa0803 0.13 -0.4 438,782 + SMa0803 0.13 -0.9 438,828 + SMa0803 0.18 +0.6 438,828 + SMa0803 0.18 +0.3 438,829 - SMa0803 0.18 -2.9 438,829 - SMa0803 0.18 -0.9 438,872 - SMa0803 0.22 +0.3 439,031 - SMa0803 0.36 -0.1 439,092 - SMa0803 0.42 -0.5 439,092 - SMa0803 0.42 +0.1 439,208 + SMa0803 0.53 +0.6 439,208 + SMa0803 0.53 -1.1 439,305 + SMa0803 0.62 -0.9 439,305 + SMa0803 0.62 +0.1 439,308 - SMa0803 0.62 -0.3 439,382 - SMa0803 0.69 -0.6 439,481 - SMa0803 0.78 +0.2 439,481 - SMa0803 0.78 -1.2 439,481 - SMa0803 0.78 -2.0 439,487 - SMa0803 0.79 +1.7 439,487 - SMa0803 0.79 +2.0
Or see this region's nucleotide sequence