Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0470 and SMa0471 are separated by 662 nucleotides SMa0471 and SMa0473 overlap by 4 nucleotides SMa0473 and SMa0475 are separated by 188 nucleotides
SMa0470: SMa0470 - ABC transporter ATP-binding protein, at 255,727 to 257,562
SMa0470
SMa0471: SMa0471 - hypothetical protein, at 258,225 to 258,533
SMa0471
SMa0473: SMa0473 - hypothetical protein, at 258,530 to 258,823
SMa0473
SMa0475: SMa0475 - TRm17a transposase, at 259,012 to 259,911
SMa0475
Position (kb) 258
259 Strain fitness (log2 ratio) -2
-1
0
1 at 257.707 kb on + strand at 257.708 kb on - strand at 257.708 kb on - strand at 257.775 kb on + strand at 257.868 kb on + strand at 257.868 kb on + strand at 257.871 kb on + strand at 257.871 kb on + strand at 257.871 kb on + strand at 257.871 kb on + strand at 257.872 kb on - strand at 257.903 kb on + strand at 257.903 kb on + strand at 257.904 kb on - strand at 257.904 kb on - strand at 257.948 kb on + strand at 257.949 kb on - strand at 258.007 kb on + strand at 258.103 kb on + strand at 258.104 kb on - strand at 258.104 kb on - strand at 258.108 kb on + strand at 258.108 kb on + strand at 258.109 kb on - strand at 258.109 kb on - strand at 258.584 kb on + strand, within SMa0473 at 258.585 kb on - strand, within SMa0473 at 258.713 kb on - strand, within SMa0473 at 258.713 kb on - strand, within SMa0473 at 258.728 kb on + strand, within SMa0473 at 258.729 kb on - strand, within SMa0473 at 258.741 kb on - strand, within SMa0473 at 258.822 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 257,707 + -2.2 257,708 - -1.6 257,708 - -2.5 257,775 + -0.6 257,868 + -1.2 257,868 + +0.6 257,871 + -0.4 257,871 + -0.1 257,871 + +1.5 257,871 + -1.1 257,872 - -0.3 257,903 + -0.1 257,903 + +0.0 257,904 - -1.7 257,904 - -0.5 257,948 + -2.2 257,949 - +0.4 258,007 + +1.2 258,103 + -0.5 258,104 - -2.5 258,104 - -0.3 258,108 + +0.6 258,108 + +0.4 258,109 - +0.0 258,109 - +0.9 258,584 + SMa0473 0.18 -1.0 258,585 - SMa0473 0.19 +0.2 258,713 - SMa0473 0.62 +0.2 258,713 - SMa0473 0.62 -1.4 258,728 + SMa0473 0.67 -1.0 258,729 - SMa0473 0.68 -0.0 258,741 - SMa0473 0.72 -0.8 258,822 - -0.3
Or see this region's nucleotide sequence