Strain Fitness in Sinorhizobium meliloti 1021 around SMa0143
Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
78,124 | + | SMa0142 | 0.50 | -1.2 | |
78,124 | + | SMa0142 | 0.50 | +0.2 | |
78,124 | + | SMa0142 | 0.50 | -0.2 | |
78,124 | + | SMa0142 | 0.50 | -1.3 | |
78,124 | + | SMa0142 | 0.50 | -1.5 | |
78,125 | - | SMa0142 | 0.50 | +1.6 | |
78,125 | - | SMa0142 | 0.50 | -2.4 | |
78,515 | - | SMa0142 | 0.78 | -0.3 | |
78,766 | + | -1.4 | |||
78,863 | - | -0.1 | |||
78,891 | - | -0.1 | |||
78,896 | + | -0.7 | |||
78,896 | + | -3.1 | |||
78,897 | - | -0.6 | |||
78,897 | - | -0.3 | |||
78,928 | + | +0.9 | |||
78,928 | + | +0.6 | |||
78,929 | - | -0.8 | |||
79,146 | + | SMa0143 | 0.33 | -0.4 | |
79,216 | + | SMa0143 | 0.46 | -0.4 | |
79,359 | + | SMa0143 | 0.73 | +0.2 | |
79,359 | + | SMa0143 | 0.73 | -0.3 | |
79,360 | - | SMa0143 | 0.73 | +0.3 | |
79,360 | - | SMa0143 | 0.73 | -0.3 | |
79,360 | - | SMa0143 | 0.73 | -0.6 | |
79,360 | - | SMa0143 | 0.73 | +0.1 | |
79,360 | - | SMa0143 | 0.73 | -0.1 | |
79,458 | + | -1.2 | |||
79,532 | + | +0.7 | |||
79,583 | + | SMa0144 | 0.10 | +0.2 | |
80,287 | + | +0.7 | |||
80,287 | + | -0.1 | |||
80,287 | + | -1.5 | |||
80,287 | + | -1.1 | |||
80,287 | + | +0.4 | |||
80,287 | + | +1.1 | |||
80,287 | + | -1.4 | |||
80,287 | + | -1.1 | |||
80,378 | + | SMa0146 | 0.16 | -2.4 | |
80,379 | - | SMa0146 | 0.16 | -0.0 | |
80,464 | + | SMa0146 | 0.32 | +0.7 | |
80,465 | - | SMa0146 | 0.32 | -1.4 | |
80,465 | - | SMa0146 | 0.32 | -0.1 |
Or see this region's nucleotide sequence