Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21635 and SM_b21636 are separated by 50 nucleotides SM_b21636 and SM_b21637 are separated by 28 nucleotides SM_b21637 and SM_b21638 are separated by 9 nucleotides
SM_b21635: SM_b21635 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase, at 1,662,986 to 1,665,052
_b21635
SM_b21636: SM_b21636 - ferredoxin reductase electron transfer protein, at 1,665,103 to 1,666,179
_b21636
SM_b21637: SM_b21637 - phenylacetic acid degradation protein, at 1,666,208 to 1,666,732
_b21637
SM_b21638: SM_b21638 - phenylacetic acid degradation protein, at 1,666,742 to 1,667,527
_b21638
Position (kb)
1665
1666
1667 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1664.288 kb on - strand, within SM_b21635 at 1664.605 kb on + strand, within SM_b21635 at 1664.606 kb on - strand, within SM_b21635 at 1664.703 kb on + strand, within SM_b21635 at 1664.784 kb on + strand, within SM_b21635 at 1664.892 kb on + strand at 1664.892 kb on + strand at 1664.893 kb on - strand at 1664.893 kb on - strand at 1665.010 kb on + strand at 1665.012 kb on + strand at 1665.114 kb on - strand at 1665.165 kb on - strand at 1665.165 kb on - strand at 1665.182 kb on + strand at 1665.182 kb on + strand at 1665.183 kb on - strand at 1665.741 kb on - strand, within SM_b21636 at 1665.741 kb on - strand, within SM_b21636 at 1665.787 kb on + strand, within SM_b21636 at 1666.011 kb on - strand, within SM_b21636 at 1666.059 kb on - strand, within SM_b21636 at 1666.166 kb on + strand at 1666.204 kb on + strand at 1666.204 kb on + strand at 1666.205 kb on - strand at 1666.225 kb on - strand at 1666.257 kb on + strand at 1666.257 kb on + strand at 1666.257 kb on + strand at 1666.258 kb on - strand at 1666.697 kb on + strand at 1666.697 kb on + strand at 1666.697 kb on + strand at 1666.697 kb on + strand at 1666.697 kb on + strand at 1666.697 kb on + strand at 1666.698 kb on - strand at 1666.698 kb on - strand at 1666.719 kb on - strand at 1666.733 kb on - strand at 1666.743 kb on + strand at 1666.743 kb on + strand at 1666.744 kb on - strand at 1666.797 kb on + strand at 1666.798 kb on - strand at 1666.798 kb on - strand at 1666.843 kb on + strand, within SM_b21638 at 1666.843 kb on + strand, within SM_b21638 at 1666.844 kb on - strand, within SM_b21638 at 1666.845 kb on + strand, within SM_b21638 at 1666.994 kb on - strand, within SM_b21638 at 1666.995 kb on + strand, within SM_b21638 at 1666.996 kb on - strand, within SM_b21638 at 1666.996 kb on - strand, within SM_b21638 at 1666.996 kb on - strand, within SM_b21638 at 1667.006 kb on - strand, within SM_b21638 at 1667.026 kb on + strand, within SM_b21638 at 1667.027 kb on - strand, within SM_b21638 at 1667.094 kb on + strand, within SM_b21638 at 1667.094 kb on + strand, within SM_b21638 at 1667.094 kb on + strand, within SM_b21638 at 1667.095 kb on - strand, within SM_b21638 at 1667.095 kb on - strand, within SM_b21638 at 1667.175 kb on + strand, within SM_b21638 at 1667.175 kb on + strand, within SM_b21638 at 1667.175 kb on + strand, within SM_b21638 at 1667.176 kb on - strand, within SM_b21638 at 1667.176 kb on - strand, within SM_b21638
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,664,288 - SM_b21635 0.63 -0.0 1,664,605 + SM_b21635 0.78 -0.1 1,664,606 - SM_b21635 0.78 +0.5 1,664,703 + SM_b21635 0.83 -0.3 1,664,784 + SM_b21635 0.87 -3.7 1,664,892 + -1.5 1,664,892 + +1.6 1,664,893 - +3.2 1,664,893 - +1.2 1,665,010 + +2.6 1,665,012 + +4.9 1,665,114 - -0.2 1,665,165 - -0.1 1,665,165 - -0.4 1,665,182 + -0.3 1,665,182 + +0.1 1,665,183 - +0.2 1,665,741 - SM_b21636 0.59 -0.6 1,665,741 - SM_b21636 0.59 +1.2 1,665,787 + SM_b21636 0.64 -2.4 1,666,011 - SM_b21636 0.84 -1.0 1,666,059 - SM_b21636 0.89 +0.2 1,666,166 + -1.5 1,666,204 + -1.7 1,666,204 + -2.8 1,666,205 - -0.8 1,666,225 - -0.7 1,666,257 + +1.9 1,666,257 + +0.1 1,666,257 + -0.4 1,666,258 - -3.5 1,666,697 + +0.2 1,666,697 + +0.3 1,666,697 + -2.5 1,666,697 + -0.7 1,666,697 + +0.2 1,666,697 + +0.8 1,666,698 - -0.4 1,666,698 - +0.1 1,666,719 - -0.6 1,666,733 - -3.0 1,666,743 + +0.8 1,666,743 + -0.4 1,666,744 - +0.1 1,666,797 + +0.2 1,666,798 - -1.2 1,666,798 - -0.2 1,666,843 + SM_b21638 0.13 +0.5 1,666,843 + SM_b21638 0.13 -0.5 1,666,844 - SM_b21638 0.13 -0.1 1,666,845 + SM_b21638 0.13 -1.7 1,666,994 - SM_b21638 0.32 -0.4 1,666,995 + SM_b21638 0.32 +0.1 1,666,996 - SM_b21638 0.32 -0.4 1,666,996 - SM_b21638 0.32 +2.2 1,666,996 - SM_b21638 0.32 +0.0 1,667,006 - SM_b21638 0.34 -0.4 1,667,026 + SM_b21638 0.36 -0.4 1,667,027 - SM_b21638 0.36 -1.0 1,667,094 + SM_b21638 0.45 -2.3 1,667,094 + SM_b21638 0.45 -0.7 1,667,094 + SM_b21638 0.45 +0.4 1,667,095 - SM_b21638 0.45 +0.2 1,667,095 - SM_b21638 0.45 -2.3 1,667,175 + SM_b21638 0.55 -0.8 1,667,175 + SM_b21638 0.55 +0.0 1,667,175 + SM_b21638 0.55 -0.9 1,667,176 - SM_b21638 0.55 +0.9 1,667,176 - SM_b21638 0.55 -0.9
Or see this region's nucleotide sequence