Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21577 and SM_b21578 are separated by 283 nucleotides SM_b21578 and SM_b21579 are separated by 59 nucleotides SM_b21579 and SM_b21580 are separated by 46 nucleotides
SM_b21577: SM_b21577 - hypothetical protein, at 1,116,175 to 1,116,675
_b21577
SM_b21578: SM_b21578 - copper-transporting P-type ATPase, at 1,116,959 to 1,119,442
_b21578
SM_b21579: SM_b21579 - MerR family transcriptional regulator, at 1,119,502 to 1,119,945
_b21579
SM_b21580: SM_b21580 - hypothetical protein, at 1,119,992 to 1,120,438
_b21580
Position (kb)
1116
1117
1118
1119
1120 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1116.177 kb on - strand at 1116.295 kb on + strand, within SM_b21577 at 1116.372 kb on + strand, within SM_b21577 at 1116.373 kb on - strand, within SM_b21577 at 1116.373 kb on - strand, within SM_b21577 at 1116.516 kb on - strand, within SM_b21577 at 1116.516 kb on - strand, within SM_b21577 at 1116.516 kb on - strand, within SM_b21577 at 1116.516 kb on - strand, within SM_b21577 at 1116.748 kb on + strand at 1116.748 kb on + strand at 1116.848 kb on + strand at 1116.915 kb on - strand at 1117.188 kb on - strand at 1117.304 kb on - strand, within SM_b21578 at 1117.391 kb on + strand, within SM_b21578 at 1117.392 kb on - strand, within SM_b21578 at 1117.592 kb on + strand, within SM_b21578 at 1117.593 kb on - strand, within SM_b21578 at 1117.593 kb on - strand, within SM_b21578 at 1117.597 kb on - strand, within SM_b21578 at 1117.730 kb on + strand, within SM_b21578 at 1117.730 kb on + strand, within SM_b21578 at 1117.787 kb on + strand, within SM_b21578 at 1117.787 kb on + strand, within SM_b21578 at 1117.788 kb on - strand, within SM_b21578 at 1117.791 kb on - strand, within SM_b21578 at 1118.034 kb on - strand, within SM_b21578 at 1118.131 kb on + strand, within SM_b21578 at 1118.131 kb on + strand, within SM_b21578 at 1118.131 kb on + strand, within SM_b21578 at 1118.132 kb on - strand, within SM_b21578 at 1118.350 kb on - strand, within SM_b21578 at 1118.840 kb on + strand, within SM_b21578 at 1119.291 kb on - strand at 1119.292 kb on + strand at 1119.292 kb on + strand at 1119.293 kb on - strand at 1119.559 kb on + strand, within SM_b21579 at 1119.559 kb on + strand, within SM_b21579 at 1119.559 kb on + strand, within SM_b21579 at 1119.560 kb on - strand, within SM_b21579 at 1119.577 kb on - strand, within SM_b21579 at 1119.607 kb on + strand, within SM_b21579 at 1119.637 kb on - strand, within SM_b21579 at 1119.785 kb on + strand, within SM_b21579 at 1119.944 kb on - strand at 1119.944 kb on - strand at 1119.984 kb on + strand at 1119.985 kb on - strand at 1119.985 kb on - strand at 1120.045 kb on - strand at 1120.120 kb on + strand, within SM_b21580 at 1120.291 kb on + strand, within SM_b21580 at 1120.292 kb on - strand, within SM_b21580 at 1120.421 kb on + strand at 1120.422 kb on - strand at 1120.422 kb on - strand at 1120.425 kb on + strand at 1120.425 kb on + strand at 1120.425 kb on + strand at 1120.425 kb on + strand at 1120.426 kb on - strand at 1120.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,116,177 - -0.2 1,116,295 + SM_b21577 0.24 -0.5 1,116,372 + SM_b21577 0.39 +0.6 1,116,373 - SM_b21577 0.40 +1.1 1,116,373 - SM_b21577 0.40 -0.4 1,116,516 - SM_b21577 0.68 -0.2 1,116,516 - SM_b21577 0.68 +1.8 1,116,516 - SM_b21577 0.68 -0.3 1,116,516 - SM_b21577 0.68 -3.4 1,116,748 + +0.6 1,116,748 + -1.2 1,116,848 + +0.1 1,116,915 - -0.5 1,117,188 - +1.4 1,117,304 - SM_b21578 0.14 +0.6 1,117,391 + SM_b21578 0.17 +0.8 1,117,392 - SM_b21578 0.17 -0.1 1,117,592 + SM_b21578 0.25 +1.1 1,117,593 - SM_b21578 0.26 +0.1 1,117,593 - SM_b21578 0.26 +1.6 1,117,597 - SM_b21578 0.26 +0.4 1,117,730 + SM_b21578 0.31 +1.2 1,117,730 + SM_b21578 0.31 -0.5 1,117,787 + SM_b21578 0.33 -0.9 1,117,787 + SM_b21578 0.33 +1.7 1,117,788 - SM_b21578 0.33 -0.6 1,117,791 - SM_b21578 0.33 -1.2 1,118,034 - SM_b21578 0.43 +1.0 1,118,131 + SM_b21578 0.47 -0.0 1,118,131 + SM_b21578 0.47 +1.1 1,118,131 + SM_b21578 0.47 +2.3 1,118,132 - SM_b21578 0.47 -0.5 1,118,350 - SM_b21578 0.56 -0.1 1,118,840 + SM_b21578 0.76 +0.3 1,119,291 - +0.3 1,119,292 + +0.7 1,119,292 + +2.7 1,119,293 - +0.0 1,119,559 + SM_b21579 0.13 -0.4 1,119,559 + SM_b21579 0.13 +1.2 1,119,559 + SM_b21579 0.13 +0.2 1,119,560 - SM_b21579 0.13 -0.8 1,119,577 - SM_b21579 0.17 -0.9 1,119,607 + SM_b21579 0.24 -0.7 1,119,637 - SM_b21579 0.30 -0.7 1,119,785 + SM_b21579 0.64 -0.4 1,119,944 - +1.9 1,119,944 - +0.3 1,119,984 + +0.5 1,119,985 - +0.8 1,119,985 - +0.5 1,120,045 - +0.1 1,120,120 + SM_b21580 0.29 +0.5 1,120,291 + SM_b21580 0.67 +1.1 1,120,292 - SM_b21580 0.67 +2.1 1,120,421 + -0.8 1,120,422 - +0.2 1,120,422 - -0.3 1,120,425 + -0.2 1,120,425 + +0.3 1,120,425 + +3.2 1,120,425 + -0.6 1,120,426 - -0.0 1,120,426 - +1.5
Or see this region's nucleotide sequence