Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21531 and SM_b21532 overlap by 1 nucleotides SM_b21532 and SM_b21533 are separated by 142 nucleotides
SM_b21531: SM_b21531 - hypothetical protein, at 1,057,500 to 1,058,537
_b21531
SM_b21532: SM_b21532 - phosphate acetyltransferase, at 1,058,537 to 1,059,529
_b21532
SM_b21533: SM_b21533 - GntR family transcriptional regulator, at 1,059,672 to 1,060,457
_b21533
Position (kb)
1058
1059
1060 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1057.560 kb on + strand at 1057.560 kb on + strand at 1057.560 kb on + strand at 1057.560 kb on + strand at 1057.561 kb on - strand at 1057.561 kb on - strand at 1057.561 kb on - strand at 1057.771 kb on + strand, within SM_b21531 at 1057.771 kb on + strand, within SM_b21531 at 1057.771 kb on + strand, within SM_b21531 at 1057.772 kb on - strand, within SM_b21531 at 1058.055 kb on + strand, within SM_b21531 at 1058.056 kb on - strand, within SM_b21531 at 1058.517 kb on + strand at 1058.518 kb on - strand at 1058.665 kb on + strand, within SM_b21532 at 1058.765 kb on - strand, within SM_b21532 at 1058.787 kb on - strand, within SM_b21532 at 1058.787 kb on - strand, within SM_b21532 at 1059.119 kb on + strand, within SM_b21532 at 1059.119 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.250 kb on + strand, within SM_b21532 at 1059.376 kb on + strand, within SM_b21532 at 1059.496 kb on + strand at 1059.496 kb on + strand at 1059.497 kb on - strand at 1059.777 kb on + strand, within SM_b21533 at 1059.777 kb on + strand, within SM_b21533 at 1059.778 kb on - strand, within SM_b21533 at 1059.778 kb on - strand, within SM_b21533 at 1059.778 kb on - strand, within SM_b21533 at 1060.066 kb on + strand, within SM_b21533 at 1060.067 kb on - strand, within SM_b21533 at 1060.067 kb on - strand, within SM_b21533 at 1060.067 kb on - strand, within SM_b21533 at 1060.067 kb on - strand, within SM_b21533 at 1060.106 kb on + strand, within SM_b21533 at 1060.106 kb on + strand, within SM_b21533 at 1060.106 kb on + strand, within SM_b21533 at 1060.107 kb on - strand, within SM_b21533 at 1060.107 kb on - strand, within SM_b21533 at 1060.107 kb on - strand, within SM_b21533 at 1060.299 kb on + strand, within SM_b21533 at 1060.299 kb on + strand, within SM_b21533 at 1060.299 kb on + strand, within SM_b21533 at 1060.319 kb on + strand, within SM_b21533 at 1060.504 kb on + strand at 1060.504 kb on + strand at 1060.505 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,057,560 + +0.3 1,057,560 + -0.4 1,057,560 + -1.3 1,057,560 + +0.5 1,057,561 - +1.0 1,057,561 - -0.7 1,057,561 - -1.3 1,057,771 + SM_b21531 0.26 -0.4 1,057,771 + SM_b21531 0.26 -0.7 1,057,771 + SM_b21531 0.26 -0.3 1,057,772 - SM_b21531 0.26 +0.2 1,058,055 + SM_b21531 0.53 -1.2 1,058,056 - SM_b21531 0.54 -0.8 1,058,517 + -1.5 1,058,518 - -0.5 1,058,665 + SM_b21532 0.13 +0.6 1,058,765 - SM_b21532 0.23 +1.2 1,058,787 - SM_b21532 0.25 +0.5 1,058,787 - SM_b21532 0.25 -0.5 1,059,119 + SM_b21532 0.59 -0.0 1,059,119 + SM_b21532 0.59 +0.7 1,059,250 + SM_b21532 0.72 -0.7 1,059,250 + SM_b21532 0.72 -0.0 1,059,250 + SM_b21532 0.72 +0.4 1,059,250 + SM_b21532 0.72 -0.9 1,059,376 + SM_b21532 0.84 +0.9 1,059,496 + +0.7 1,059,496 + +1.5 1,059,497 - +0.2 1,059,777 + SM_b21533 0.13 -2.5 1,059,777 + SM_b21533 0.13 +1.3 1,059,778 - SM_b21533 0.13 -0.0 1,059,778 - SM_b21533 0.13 +2.6 1,059,778 - SM_b21533 0.13 +1.3 1,060,066 + SM_b21533 0.50 +0.4 1,060,067 - SM_b21533 0.50 -0.3 1,060,067 - SM_b21533 0.50 +1.3 1,060,067 - SM_b21533 0.50 +1.4 1,060,067 - SM_b21533 0.50 -2.1 1,060,106 + SM_b21533 0.55 -2.2 1,060,106 + SM_b21533 0.55 -1.7 1,060,106 + SM_b21533 0.55 +0.0 1,060,107 - SM_b21533 0.55 +0.2 1,060,107 - SM_b21533 0.55 +0.2 1,060,107 - SM_b21533 0.55 -0.8 1,060,299 + SM_b21533 0.80 +0.3 1,060,299 + SM_b21533 0.80 -0.4 1,060,299 + SM_b21533 0.80 +0.4 1,060,319 + SM_b21533 0.82 -0.7 1,060,504 + -0.5 1,060,504 + +0.1 1,060,505 - +0.2
Or see this region's nucleotide sequence