Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21470 and SM_b21471 overlap by 23 nucleotides SM_b21471 and SM_b21472 are separated by 43 nucleotides SM_b21472 and SM_b21473 are separated by 40 nucleotides SM_b21473 and SM_b21474 overlap by 4 nucleotides
SM_b21470: SM_b21470 - hypothetical protein, at 1,397,735 to 1,398,016
_b21470
SM_b21471: SM_b21471 - hypothetical protein, at 1,397,994 to 1,398,242
_b21471
SM_b21472: SM_b21472 - hypothetical protein, at 1,398,286 to 1,398,825
_b21472
SM_b21473: SM_b21473 - hypothetical protein, at 1,398,866 to 1,399,300
_b21473
SM_b21474: SM_b21474 - 3-ketoacyl-ACP reductase, at 1,399,297 to 1,400,079
_b21474
Position (kb)
1398
1399
1400 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1397.877 kb on + strand, within SM_b21470 at 1398.180 kb on + strand, within SM_b21471 at 1398.180 kb on + strand, within SM_b21471 at 1398.181 kb on - strand, within SM_b21471 at 1398.181 kb on - strand, within SM_b21471 at 1398.231 kb on - strand at 1398.231 kb on - strand at 1398.308 kb on + strand at 1398.309 kb on - strand at 1398.438 kb on + strand, within SM_b21472 at 1398.452 kb on - strand, within SM_b21472 at 1398.488 kb on + strand, within SM_b21472 at 1398.489 kb on - strand, within SM_b21472 at 1398.489 kb on - strand, within SM_b21472 at 1398.495 kb on - strand at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.687 kb on - strand, within SM_b21472 at 1398.768 kb on + strand, within SM_b21472 at 1398.769 kb on - strand at 1398.928 kb on + strand, within SM_b21473 at 1398.928 kb on + strand, within SM_b21473 at 1398.944 kb on - strand, within SM_b21473 at 1399.246 kb on - strand, within SM_b21473 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.530 kb on + strand, within SM_b21474 at 1399.544 kb on + strand, within SM_b21474 at 1399.544 kb on + strand, within SM_b21474 at 1399.545 kb on - strand, within SM_b21474 at 1399.765 kb on + strand, within SM_b21474 at 1399.824 kb on + strand, within SM_b21474 at 1399.950 kb on + strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1400.120 kb on + strand at 1400.120 kb on + strand at 1400.165 kb on - strand at 1400.165 kb on - strand at 1400.166 kb on + strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.210 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,397,877 + SM_b21470 0.50 -1.0 1,398,180 + SM_b21471 0.75 +0.1 1,398,180 + SM_b21471 0.75 -0.6 1,398,181 - SM_b21471 0.75 +0.1 1,398,181 - SM_b21471 0.75 +0.6 1,398,231 - -0.4 1,398,231 - +1.1 1,398,308 + +0.2 1,398,309 - -0.4 1,398,438 + SM_b21472 0.28 +0.2 1,398,452 - SM_b21472 0.31 +0.3 1,398,488 + SM_b21472 0.37 -0.9 1,398,489 - SM_b21472 0.38 +0.1 1,398,489 - SM_b21472 0.38 +2.1 1,398,495 - +2.4 1,398,682 + SM_b21472 0.73 +0.9 1,398,682 + SM_b21472 0.73 +0.0 1,398,682 + SM_b21472 0.73 +2.2 1,398,682 + SM_b21472 0.73 -0.4 1,398,682 + SM_b21472 0.73 -1.1 1,398,683 - SM_b21472 0.74 -3.7 1,398,683 - SM_b21472 0.74 +1.4 1,398,683 - SM_b21472 0.74 +0.4 1,398,683 - SM_b21472 0.74 -0.3 1,398,683 - SM_b21472 0.74 -2.5 1,398,686 + SM_b21472 0.74 -1.3 1,398,686 + SM_b21472 0.74 +0.0 1,398,686 + SM_b21472 0.74 +1.1 1,398,687 - SM_b21472 0.74 -1.0 1,398,768 + SM_b21472 0.89 -0.0 1,398,769 - +2.1 1,398,928 + SM_b21473 0.14 -1.3 1,398,928 + SM_b21473 0.14 +0.1 1,398,944 - SM_b21473 0.18 -0.2 1,399,246 - SM_b21473 0.87 -0.7 1,399,445 + SM_b21474 0.19 -1.9 1,399,445 + SM_b21474 0.19 -2.2 1,399,445 + SM_b21474 0.19 -0.9 1,399,445 + SM_b21474 0.19 -0.3 1,399,446 - SM_b21474 0.19 -1.5 1,399,446 - SM_b21474 0.19 +0.2 1,399,446 - SM_b21474 0.19 +0.5 1,399,446 - SM_b21474 0.19 -0.6 1,399,530 + SM_b21474 0.30 +1.9 1,399,544 + SM_b21474 0.32 -0.2 1,399,544 + SM_b21474 0.32 +1.7 1,399,545 - SM_b21474 0.32 -0.2 1,399,765 + SM_b21474 0.60 -0.7 1,399,824 + SM_b21474 0.67 +0.4 1,399,950 + SM_b21474 0.83 +0.1 1,399,951 - SM_b21474 0.84 -2.2 1,399,951 - SM_b21474 0.84 +1.7 1,400,120 + +0.3 1,400,120 + +0.7 1,400,165 - -1.2 1,400,165 - +0.2 1,400,166 + -0.6 1,400,167 - -0.2 1,400,167 - +0.2 1,400,167 - -0.9 1,400,171 + -0.5 1,400,171 + +0.4 1,400,171 + -2.2 1,400,210 + +0.4
Or see this region's nucleotide sequence