Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21448 and SM_b21449 are separated by 4 nucleotides SM_b21449 and SM_b21450 are separated by 194 nucleotides SM_b21450 and SM_b21452 are separated by 184 nucleotides SM_b21452 and SM_b21454 are separated by 266 nucleotides
SM_b21448: SM_b21448 - DNA polymerase related protein, at 1,378,745 to 1,379,386
_b21448
SM_b21449: SM_b21449 - glutathione S-transferase, at 1,379,391 to 1,380,113
_b21449
SM_b21450: SM_b21450 - hypothetical protein, at 1,380,308 to 1,380,847
_b21450
SM_b21452: SM_b21452 - hypothetical protein, at 1,381,032 to 1,381,556
_b21452
SM_b21454: SM_b21454 - hypothetical protein, at 1,381,823 to 1,382,137
_b21454
Position (kb)
1380
1381 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1379.470 kb on + strand, within SM_b21449 at 1379.470 kb on + strand, within SM_b21449 at 1379.539 kb on + strand, within SM_b21449 at 1379.540 kb on - strand, within SM_b21449 at 1379.630 kb on + strand, within SM_b21449 at 1379.631 kb on - strand, within SM_b21449 at 1379.631 kb on - strand, within SM_b21449 at 1379.674 kb on + strand, within SM_b21449 at 1379.831 kb on + strand, within SM_b21449 at 1379.832 kb on - strand, within SM_b21449 at 1379.832 kb on - strand, within SM_b21449 at 1379.832 kb on - strand, within SM_b21449 at 1379.910 kb on + strand, within SM_b21449 at 1379.911 kb on - strand, within SM_b21449 at 1380.029 kb on - strand, within SM_b21449 at 1380.098 kb on - strand at 1380.106 kb on + strand at 1380.106 kb on + strand at 1380.106 kb on + strand at 1380.107 kb on - strand at 1380.209 kb on + strand at 1380.210 kb on - strand at 1380.219 kb on + strand at 1380.243 kb on - strand at 1380.243 kb on - strand at 1380.380 kb on + strand, within SM_b21450 at 1380.423 kb on + strand, within SM_b21450 at 1380.424 kb on - strand, within SM_b21450 at 1380.491 kb on + strand, within SM_b21450 at 1380.492 kb on - strand, within SM_b21450 at 1380.594 kb on + strand, within SM_b21450 at 1380.594 kb on + strand, within SM_b21450 at 1380.594 kb on + strand, within SM_b21450 at 1380.982 kb on + strand at 1380.982 kb on + strand at 1380.983 kb on - strand at 1381.000 kb on + strand at 1381.001 kb on - strand at 1381.001 kb on - strand at 1381.001 kb on - strand at 1381.001 kb on - strand at 1381.048 kb on + strand at 1381.049 kb on - strand at 1381.063 kb on + strand at 1381.063 kb on + strand at 1381.064 kb on - strand at 1381.064 kb on - strand at 1381.178 kb on + strand, within SM_b21452 at 1381.178 kb on + strand, within SM_b21452 at 1381.179 kb on - strand, within SM_b21452 at 1381.179 kb on - strand, within SM_b21452 at 1381.737 kb on + strand at 1381.738 kb on - strand at 1381.738 kb on - strand at 1381.738 kb on - strand at 1381.811 kb on + strand at 1381.812 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,379,470 + SM_b21449 0.11 +2.2 1,379,470 + SM_b21449 0.11 +0.0 1,379,539 + SM_b21449 0.20 -0.1 1,379,540 - SM_b21449 0.21 +0.3 1,379,630 + SM_b21449 0.33 +0.1 1,379,631 - SM_b21449 0.33 -0.4 1,379,631 - SM_b21449 0.33 +1.5 1,379,674 + SM_b21449 0.39 -0.4 1,379,831 + SM_b21449 0.61 +0.3 1,379,832 - SM_b21449 0.61 +0.2 1,379,832 - SM_b21449 0.61 +1.6 1,379,832 - SM_b21449 0.61 +0.9 1,379,910 + SM_b21449 0.72 -0.0 1,379,911 - SM_b21449 0.72 -1.7 1,380,029 - SM_b21449 0.88 +2.0 1,380,098 - +0.0 1,380,106 + +0.7 1,380,106 + +0.1 1,380,106 + +3.2 1,380,107 - -0.5 1,380,209 + -1.0 1,380,210 - -1.6 1,380,219 + +0.6 1,380,243 - -1.7 1,380,243 - +0.2 1,380,380 + SM_b21450 0.13 -0.7 1,380,423 + SM_b21450 0.21 -0.4 1,380,424 - SM_b21450 0.21 -1.0 1,380,491 + SM_b21450 0.34 -0.0 1,380,492 - SM_b21450 0.34 -3.7 1,380,594 + SM_b21450 0.53 -0.3 1,380,594 + SM_b21450 0.53 -0.1 1,380,594 + SM_b21450 0.53 +0.3 1,380,982 + +0.7 1,380,982 + -1.3 1,380,983 - -0.7 1,381,000 + -0.4 1,381,001 - -1.9 1,381,001 - +0.3 1,381,001 - +0.4 1,381,001 - +0.7 1,381,048 + -1.6 1,381,049 - -0.5 1,381,063 + +0.9 1,381,063 + +1.1 1,381,064 - -0.4 1,381,064 - +0.8 1,381,178 + SM_b21452 0.28 +2.3 1,381,178 + SM_b21452 0.28 +1.0 1,381,179 - SM_b21452 0.28 +0.1 1,381,179 - SM_b21452 0.28 +0.3 1,381,737 + +0.1 1,381,738 - +0.0 1,381,738 - +0.7 1,381,738 - -0.1 1,381,811 + -1.0 1,381,812 - -1.2
Or see this region's nucleotide sequence