Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21363 and SM_b21364 are separated by 8 nucleotides SM_b21364 and SM_b21365 overlap by 8 nucleotides SM_b21365 and SM_b21669 overlap by 19 nucleotides SM_b21669 and SM_b21366 are separated by 40 nucleotides
SM_b21363: SM_b21363 - hypothetical protein, at 1,026,537 to 1,027,631
_b21363
SM_b21364: SM_b21364 - membrane-anchored oxidoreductase, L-sorbosone dehydrogenase, at 1,027,640 to 1,029,193
_b21364
SM_b21365: SM_b21365 - hypothetical protein, at 1,029,186 to 1,029,638
_b21365
SM_b21669: SM_b21669 - hypothetical protein, at 1,029,620 to 1,029,847
_b21669
SM_b21366: SM_b21366 - hypothetical protein, at 1,029,888 to 1,030,469
_b21366
Position (kb)
1027
1028
1029
1030 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1026.823 kb on - strand, within SM_b21363 at 1026.823 kb on - strand, within SM_b21363 at 1026.839 kb on - strand, within SM_b21363 at 1026.870 kb on + strand, within SM_b21363 at 1026.871 kb on - strand, within SM_b21363 at 1026.871 kb on - strand, within SM_b21363 at 1026.911 kb on + strand, within SM_b21363 at 1026.911 kb on + strand, within SM_b21363 at 1026.912 kb on - strand, within SM_b21363 at 1026.912 kb on - strand, within SM_b21363 at 1026.912 kb on - strand, within SM_b21363 at 1027.015 kb on + strand, within SM_b21363 at 1027.083 kb on - strand, within SM_b21363 at 1027.083 kb on - strand, within SM_b21363 at 1027.253 kb on - strand, within SM_b21363 at 1027.303 kb on - strand, within SM_b21363 at 1027.346 kb on + strand, within SM_b21363 at 1027.405 kb on - strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.428 kb on + strand, within SM_b21363 at 1027.428 kb on + strand, within SM_b21363 at 1027.429 kb on - strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.441 kb on - strand, within SM_b21363 at 1027.441 kb on - strand, within SM_b21363 at 1027.441 kb on - strand, within SM_b21363 at 1027.596 kb on + strand at 1027.596 kb on + strand at 1027.596 kb on + strand at 1027.596 kb on + strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.630 kb on - strand at 1027.641 kb on + strand at 1027.641 kb on + strand at 1027.729 kb on + strand at 1027.730 kb on - strand at 1028.028 kb on + strand, within SM_b21364 at 1028.028 kb on + strand, within SM_b21364 at 1028.029 kb on - strand, within SM_b21364 at 1028.029 kb on - strand, within SM_b21364 at 1028.029 kb on - strand, within SM_b21364 at 1028.040 kb on + strand, within SM_b21364 at 1028.041 kb on - strand, within SM_b21364 at 1028.041 kb on - strand, within SM_b21364 at 1028.081 kb on + strand, within SM_b21364 at 1028.082 kb on - strand, within SM_b21364 at 1028.170 kb on - strand, within SM_b21364 at 1028.170 kb on - strand, within SM_b21364 at 1028.244 kb on + strand, within SM_b21364 at 1028.244 kb on + strand, within SM_b21364 at 1028.245 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.433 kb on - strand, within SM_b21364 at 1028.433 kb on - strand, within SM_b21364 at 1028.484 kb on - strand, within SM_b21364 at 1028.511 kb on + strand, within SM_b21364 at 1028.512 kb on - strand, within SM_b21364 at 1028.587 kb on + strand, within SM_b21364 at 1028.631 kb on + strand, within SM_b21364 at 1028.637 kb on + strand, within SM_b21364 at 1028.638 kb on - strand, within SM_b21364 at 1028.667 kb on + strand, within SM_b21364 at 1028.667 kb on + strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.921 kb on - strand, within SM_b21364 at 1029.187 kb on + strand at 1029.187 kb on + strand at 1029.187 kb on + strand at 1029.188 kb on - strand at 1029.441 kb on + strand, within SM_b21365 at 1029.442 kb on - strand, within SM_b21365 at 1029.554 kb on + strand, within SM_b21365 at 1029.682 kb on + strand, within SM_b21669 at 1029.683 kb on - strand, within SM_b21669 at 1029.683 kb on - strand, within SM_b21669 at 1029.683 kb on - strand, within SM_b21669 at 1029.908 kb on + strand at 1029.908 kb on + strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.920 kb on + strand at 1029.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,026,823 - SM_b21363 0.26 +0.5 1,026,823 - SM_b21363 0.26 +0.1 1,026,839 - SM_b21363 0.28 +1.1 1,026,870 + SM_b21363 0.30 +1.4 1,026,871 - SM_b21363 0.31 +0.5 1,026,871 - SM_b21363 0.31 -0.8 1,026,911 + SM_b21363 0.34 -1.7 1,026,911 + SM_b21363 0.34 -0.6 1,026,912 - SM_b21363 0.34 -1.3 1,026,912 - SM_b21363 0.34 +0.6 1,026,912 - SM_b21363 0.34 -0.3 1,027,015 + SM_b21363 0.44 +0.7 1,027,083 - SM_b21363 0.50 -3.7 1,027,083 - SM_b21363 0.50 +0.5 1,027,253 - SM_b21363 0.65 -0.9 1,027,303 - SM_b21363 0.70 +0.1 1,027,346 + SM_b21363 0.74 -0.2 1,027,405 - SM_b21363 0.79 -0.7 1,027,407 + SM_b21363 0.79 -0.5 1,027,407 + SM_b21363 0.79 +0.2 1,027,407 + SM_b21363 0.79 -0.6 1,027,407 + SM_b21363 0.79 +0.8 1,027,428 + SM_b21363 0.81 +0.2 1,027,428 + SM_b21363 0.81 -0.8 1,027,429 - SM_b21363 0.81 -0.5 1,027,440 + SM_b21363 0.82 +0.1 1,027,440 + SM_b21363 0.82 -0.9 1,027,440 + SM_b21363 0.82 -0.8 1,027,440 + SM_b21363 0.82 +0.6 1,027,441 - SM_b21363 0.83 -2.2 1,027,441 - SM_b21363 0.83 +0.6 1,027,441 - SM_b21363 0.83 -0.8 1,027,596 + -2.1 1,027,596 + -0.2 1,027,596 + -1.0 1,027,596 + -0.4 1,027,597 - -0.7 1,027,597 - -1.7 1,027,597 - +0.3 1,027,597 - +1.6 1,027,597 - +1.6 1,027,597 - -0.2 1,027,630 - -0.1 1,027,641 + -1.0 1,027,641 + +0.2 1,027,729 + -0.6 1,027,730 - +1.2 1,028,028 + SM_b21364 0.25 +0.6 1,028,028 + SM_b21364 0.25 -2.4 1,028,029 - SM_b21364 0.25 +0.1 1,028,029 - SM_b21364 0.25 +0.8 1,028,029 - SM_b21364 0.25 -0.8 1,028,040 + SM_b21364 0.26 -0.3 1,028,041 - SM_b21364 0.26 +0.5 1,028,041 - SM_b21364 0.26 -1.5 1,028,081 + SM_b21364 0.28 -0.8 1,028,082 - SM_b21364 0.28 +0.4 1,028,170 - SM_b21364 0.34 -3.4 1,028,170 - SM_b21364 0.34 +0.2 1,028,244 + SM_b21364 0.39 -1.5 1,028,244 + SM_b21364 0.39 -3.6 1,028,245 - SM_b21364 0.39 -3.7 1,028,263 - SM_b21364 0.40 -0.4 1,028,263 - SM_b21364 0.40 -0.1 1,028,263 - SM_b21364 0.40 -1.0 1,028,263 - SM_b21364 0.40 -0.8 1,028,263 - SM_b21364 0.40 +0.1 1,028,433 - SM_b21364 0.51 -0.0 1,028,433 - SM_b21364 0.51 -0.1 1,028,484 - SM_b21364 0.54 -1.1 1,028,511 + SM_b21364 0.56 +0.0 1,028,512 - SM_b21364 0.56 +1.6 1,028,587 + SM_b21364 0.61 +2.5 1,028,631 + SM_b21364 0.64 -1.6 1,028,637 + SM_b21364 0.64 +0.2 1,028,638 - SM_b21364 0.64 -1.1 1,028,667 + SM_b21364 0.66 +0.3 1,028,667 + SM_b21364 0.66 -0.8 1,028,668 - SM_b21364 0.66 -0.3 1,028,668 - SM_b21364 0.66 -0.9 1,028,668 - SM_b21364 0.66 -0.4 1,028,668 - SM_b21364 0.66 -0.4 1,028,668 - SM_b21364 0.66 +0.0 1,028,921 - SM_b21364 0.82 -0.8 1,029,187 + +0.8 1,029,187 + -1.2 1,029,187 + -0.1 1,029,188 - +1.9 1,029,441 + SM_b21365 0.56 +0.3 1,029,442 - SM_b21365 0.57 -0.6 1,029,554 + SM_b21365 0.81 -1.0 1,029,682 + SM_b21669 0.27 +0.8 1,029,683 - SM_b21669 0.28 -1.5 1,029,683 - SM_b21669 0.28 +0.3 1,029,683 - SM_b21669 0.28 -0.8 1,029,908 + -0.3 1,029,908 + -1.3 1,029,909 - +0.3 1,029,909 - +0.6 1,029,909 - -2.4 1,029,909 - +1.1 1,029,909 - +1.2 1,029,920 + +1.0 1,029,921 - +1.1
Or see this region's nucleotide sequence