Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21165 and SM_b21166 overlap by 4 nucleotides SM_b21166 and SM_b21167 are separated by 34 nucleotides
SM_b21165: SM_b21165 - Histidine ammonia-lyase (EC 4.3.1.3) (from data) , at 910,662 to 912,197
_b21165
SM_b21166: SM_b21166 - Imidazolonepropionase (EC 3.5.2.7) (from data) , at 912,194 to 913,609
_b21166
SM_b21167: SM_b21167 - reverse transcriptasematurase, at 913,644 to 915,005
_b21167
Position (kb)
912
913
914 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.459 kb on + strand, within SM_b21165 at 911.744 kb on + strand, within SM_b21165 at 911.745 kb on - strand, within SM_b21165 at 911.745 kb on - strand, within SM_b21165 at 911.938 kb on - strand, within SM_b21165 at 912.040 kb on + strand, within SM_b21165 at 912.142 kb on + strand at 912.142 kb on + strand at 912.143 kb on - strand at 912.255 kb on + strand at 912.543 kb on + strand, within SM_b21166 at 912.616 kb on - strand, within SM_b21166 at 912.645 kb on + strand, within SM_b21166 at 912.850 kb on - strand, within SM_b21166 at 912.900 kb on + strand, within SM_b21166 at 912.900 kb on + strand, within SM_b21166 at 912.998 kb on - strand, within SM_b21166 at 913.137 kb on + strand, within SM_b21166 at 913.138 kb on - strand, within SM_b21166 at 913.195 kb on + strand, within SM_b21166 at 913.195 kb on + strand, within SM_b21166 at 913.441 kb on + strand, within SM_b21166 at 913.442 kb on - strand, within SM_b21166 at 913.478 kb on - strand at 913.478 kb on - strand at 913.517 kb on + strand at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.504 kb on + strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 911,359 + SM_b21165 0.45 +0.1 911,359 + SM_b21165 0.45 -1.4 911,359 + SM_b21165 0.45 -0.2 911,360 - SM_b21165 0.45 -0.1 911,360 - SM_b21165 0.45 -0.2 911,459 + SM_b21165 0.52 +1.9 911,744 + SM_b21165 0.70 -1.5 911,745 - SM_b21165 0.71 -0.4 911,745 - SM_b21165 0.71 -1.8 911,938 - SM_b21165 0.83 +0.4 912,040 + SM_b21165 0.90 -0.7 912,142 + +0.3 912,142 + -0.1 912,143 - -0.1 912,255 + -0.4 912,543 + SM_b21166 0.25 -0.3 912,616 - SM_b21166 0.30 +0.0 912,645 + SM_b21166 0.32 +0.9 912,850 - SM_b21166 0.46 -0.7 912,900 + SM_b21166 0.50 -0.9 912,900 + SM_b21166 0.50 +0.4 912,998 - SM_b21166 0.57 +0.6 913,137 + SM_b21166 0.67 -0.8 913,138 - SM_b21166 0.67 -3.3 913,195 + SM_b21166 0.71 +3.5 913,195 + SM_b21166 0.71 +2.4 913,441 + SM_b21166 0.88 -0.8 913,442 - SM_b21166 0.88 -1.3 913,478 - -0.5 913,478 - -3.1 913,517 + +0.1 914,503 + SM_b21167 0.63 -0.5 914,503 + SM_b21167 0.63 +1.9 914,503 + SM_b21167 0.63 -1.8 914,504 + SM_b21167 0.63 -0.2 914,504 - SM_b21167 0.63 -1.3 914,504 - SM_b21167 0.63 +1.5
Or see this region's nucleotide sequence