Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21025 and SM_b21026 are separated by 143 nucleotides SM_b21026 and SM_b21027 are separated by 696 nucleotides SM_b21027 and SM_b21028 are separated by 214 nucleotides SM_b21028 and SM_b21029 are separated by 97 nucleotides
SM_b21025: SM_b21025 - hypothetical protein, at 647,391 to 647,810
_b21025
SM_b21026: SM_b21026 - exopeptide, at 647,954 to 648,091
_b21026
SM_b21027: SM_b21027 - hypothetical protein, at 648,788 to 649,504
_b21027
SM_b21028: SM_b21028 - hypothetical protein, at 649,719 to 649,880
_b21028
SM_b21029: SM_b21029 - hypothetical protein, at 649,978 to 650,502
_b21029
Position (kb) 648
649
650 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 647.820 kb on - strand at 647.934 kb on + strand at 647.935 kb on - strand at 647.935 kb on - strand at 647.935 kb on - strand at 647.960 kb on + strand at 647.961 kb on - strand at 648.062 kb on + strand, within SM_b21026 at 648.062 kb on + strand, within SM_b21026 at 648.062 kb on + strand, within SM_b21026 at 648.063 kb on - strand, within SM_b21026 at 648.096 kb on + strand at 648.097 kb on - strand at 648.097 kb on - strand at 648.097 kb on - strand at 648.099 kb on + strand at 648.100 kb on - strand at 648.135 kb on + strand at 648.135 kb on + strand at 648.136 kb on - strand at 648.214 kb on + strand at 648.223 kb on + strand at 648.223 kb on + strand at 648.224 kb on - strand at 648.285 kb on - strand at 648.296 kb on + strand at 648.297 kb on - strand at 648.297 kb on - strand at 648.539 kb on + strand at 648.539 kb on + strand at 648.540 kb on - strand at 648.593 kb on - strand at 648.593 kb on - strand at 648.594 kb on + strand at 648.594 kb on + strand at 648.595 kb on - strand at 648.635 kb on - strand at 648.699 kb on + strand at 648.731 kb on + strand at 648.756 kb on + strand at 648.773 kb on + strand at 648.796 kb on + strand at 648.796 kb on + strand at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.862 kb on - strand, within SM_b21027 at 648.862 kb on - strand, within SM_b21027 at 648.877 kb on - strand, within SM_b21027 at 648.879 kb on - strand, within SM_b21027 at 648.879 kb on - strand, within SM_b21027 at 649.172 kb on - strand, within SM_b21027 at 649.172 kb on - strand, within SM_b21027 at 649.172 kb on - strand, within SM_b21027 at 649.175 kb on + strand, within SM_b21027 at 649.176 kb on - strand, within SM_b21027 at 649.176 kb on - strand, within SM_b21027 at 649.176 kb on - strand, within SM_b21027 at 649.420 kb on + strand, within SM_b21027 at 649.447 kb on + strand at 649.560 kb on + strand at 649.560 kb on + strand at 649.560 kb on + strand at 649.561 kb on - strand at 649.611 kb on - strand at 649.644 kb on + strand at 649.645 kb on - strand at 649.654 kb on + strand at 649.657 kb on - strand at 649.657 kb on - strand at 649.707 kb on + strand at 649.707 kb on + strand at 649.707 kb on + strand at 649.708 kb on - strand at 649.708 kb on - strand at 649.711 kb on + strand at 649.712 kb on - strand at 649.712 kb on - strand at 649.758 kb on + strand, within SM_b21028 at 649.825 kb on + strand, within SM_b21028 at 649.845 kb on + strand, within SM_b21028 at 649.846 kb on - strand, within SM_b21028 at 649.900 kb on + strand at 649.900 kb on + strand at 649.901 kb on - strand at 649.925 kb on - strand at 649.929 kb on - strand at 649.936 kb on - strand at 649.936 kb on - strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.978 kb on - strand at 649.978 kb on - strand at 650.129 kb on - strand, within SM_b21029 at 650.136 kb on + strand, within SM_b21029 at 650.214 kb on - strand, within SM_b21029 at 650.281 kb on - strand, within SM_b21029 at 650.345 kb on + strand, within SM_b21029 at 650.346 kb on - strand, within SM_b21029 at 650.436 kb on + strand, within SM_b21029 at 650.436 kb on + strand, within SM_b21029 at 650.437 kb on - strand, within SM_b21029 at 650.437 kb on - strand, within SM_b21029 at 650.500 kb on + strand at 650.500 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 647,820 - -0.0 647,934 + -0.5 647,935 - -0.0 647,935 - -2.8 647,935 - -0.5 647,960 + -0.4 647,961 - -0.7 648,062 + SM_b21026 0.78 +1.1 648,062 + SM_b21026 0.78 +0.0 648,062 + SM_b21026 0.78 +0.6 648,063 - SM_b21026 0.79 -1.3 648,096 + +1.1 648,097 - +0.8 648,097 - -0.3 648,097 - +0.8 648,099 + +0.7 648,100 - -0.5 648,135 + -1.1 648,135 + -0.4 648,136 - -2.1 648,214 + +0.4 648,223 + +0.6 648,223 + -0.7 648,224 - +0.9 648,285 - -1.2 648,296 + +0.7 648,297 - +0.5 648,297 - -0.8 648,539 + -0.2 648,539 + -0.7 648,540 - +0.2 648,593 - -0.1 648,593 - -0.3 648,594 + +0.1 648,594 + -0.1 648,595 - -0.4 648,635 - -0.3 648,699 + -2.1 648,731 + -1.1 648,756 + -0.3 648,773 + +0.3 648,796 + -1.9 648,796 + -0.7 648,861 + SM_b21027 0.10 -0.4 648,861 + SM_b21027 0.10 -0.1 648,861 + SM_b21027 0.10 -0.3 648,861 + SM_b21027 0.10 +1.4 648,862 - SM_b21027 0.10 -0.2 648,862 - SM_b21027 0.10 -0.1 648,877 - SM_b21027 0.12 +0.7 648,879 - SM_b21027 0.13 -0.2 648,879 - SM_b21027 0.13 -0.8 649,172 - SM_b21027 0.54 +0.1 649,172 - SM_b21027 0.54 +2.1 649,172 - SM_b21027 0.54 +0.3 649,175 + SM_b21027 0.54 +1.3 649,176 - SM_b21027 0.54 +0.9 649,176 - SM_b21027 0.54 +0.9 649,176 - SM_b21027 0.54 +0.2 649,420 + SM_b21027 0.88 -0.1 649,447 + +0.8 649,560 + -1.5 649,560 + -0.4 649,560 + -0.3 649,561 - +0.2 649,611 - -1.4 649,644 + -2.0 649,645 - +0.0 649,654 + -0.1 649,657 - -2.0 649,657 - +0.3 649,707 + -0.6 649,707 + +0.3 649,707 + -0.2 649,708 - +0.7 649,708 - +0.4 649,711 + -0.4 649,712 - +1.6 649,712 - -2.9 649,758 + SM_b21028 0.24 -0.7 649,825 + SM_b21028 0.65 +1.6 649,845 + SM_b21028 0.78 -0.1 649,846 - SM_b21028 0.78 +0.5 649,900 + -0.5 649,900 + -0.2 649,901 - +1.4 649,925 - +0.6 649,929 - -1.0 649,936 - -1.8 649,936 - -0.9 649,977 + -1.3 649,977 + -1.0 649,977 + +0.4 649,977 + +0.4 649,977 + +1.5 649,978 - +0.2 649,978 - -1.0 650,129 - SM_b21029 0.29 -0.2 650,136 + SM_b21029 0.30 +0.8 650,214 - SM_b21029 0.45 +0.9 650,281 - SM_b21029 0.58 +0.7 650,345 + SM_b21029 0.70 +2.6 650,346 - SM_b21029 0.70 +1.1 650,436 + SM_b21029 0.87 -0.5 650,436 + SM_b21029 0.87 +0.4 650,437 - SM_b21029 0.87 -1.2 650,437 - SM_b21029 0.87 -0.6 650,500 + +0.3 650,500 + -0.2
Or see this region's nucleotide sequence