Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20986 and SM_b20987 are separated by 22 nucleotides SM_b20987 and SM_b20988 are separated by 24 nucleotides
SM_b20986: SM_b20986 - Nitrate reductase (EC 1.7.99.4) (from data) , at 1,218,112 to 1,220,769
_b20986
SM_b20987: SM_b20987 - siroheme synthase, at 1,220,792 to 1,221,874
_b20987
SM_b20988: SM_b20988 - hypothetical protein, at 1,221,899 to 1,222,384
_b20988
Position (kb)
1220
1221
1222 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1219.836 kb on + strand, within SM_b20986 at 1219.836 kb on + strand, within SM_b20986 at 1219.837 kb on - strand, within SM_b20986 at 1219.837 kb on - strand, within SM_b20986 at 1219.890 kb on + strand, within SM_b20986 at 1219.890 kb on + strand, within SM_b20986 at 1219.891 kb on - strand, within SM_b20986 at 1219.891 kb on - strand, within SM_b20986 at 1220.218 kb on + strand, within SM_b20986 at 1220.242 kb on - strand, within SM_b20986 at 1220.394 kb on + strand, within SM_b20986 at 1220.395 kb on - strand, within SM_b20986 at 1220.455 kb on - strand, within SM_b20986 at 1220.553 kb on - strand at 1220.738 kb on + strand at 1220.738 kb on + strand at 1220.738 kb on + strand at 1220.738 kb on + strand at 1220.738 kb on + strand at 1220.739 kb on - strand at 1220.921 kb on + strand, within SM_b20987 at 1220.922 kb on - strand, within SM_b20987 at 1221.408 kb on + strand, within SM_b20987 at 1221.408 kb on + strand, within SM_b20987 at 1221.977 kb on + strand, within SM_b20988 at 1221.977 kb on + strand, within SM_b20988 at 1221.978 kb on - strand, within SM_b20988 at 1221.978 kb on - strand, within SM_b20988 at 1221.978 kb on - strand, within SM_b20988 at 1222.122 kb on + strand, within SM_b20988 at 1222.122 kb on + strand, within SM_b20988 at 1222.184 kb on + strand, within SM_b20988 at 1222.251 kb on + strand, within SM_b20988 at 1222.251 kb on + strand, within SM_b20988 at 1222.251 kb on + strand, within SM_b20988 at 1222.251 kb on + strand, within SM_b20988 at 1222.251 kb on + strand, within SM_b20988 at 1222.251 kb on + strand, within SM_b20988 at 1222.252 kb on - strand, within SM_b20988 at 1222.252 kb on - strand, within SM_b20988 at 1222.252 kb on - strand, within SM_b20988 at 1222.347 kb on + strand at 1222.348 kb on - strand at 1222.354 kb on - strand at 1222.472 kb on - strand at 1222.472 kb on - strand at 1222.472 kb on - strand at 1222.587 kb on - strand at 1222.616 kb on + strand at 1222.617 kb on - strand at 1222.631 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,219,836 + SM_b20986 0.65 -0.3 1,219,836 + SM_b20986 0.65 -0.1 1,219,837 - SM_b20986 0.65 +0.8 1,219,837 - SM_b20986 0.65 +0.5 1,219,890 + SM_b20986 0.67 -0.7 1,219,890 + SM_b20986 0.67 +0.5 1,219,891 - SM_b20986 0.67 +1.8 1,219,891 - SM_b20986 0.67 -2.6 1,220,218 + SM_b20986 0.79 -0.2 1,220,242 - SM_b20986 0.80 +0.1 1,220,394 + SM_b20986 0.86 +0.1 1,220,395 - SM_b20986 0.86 +0.4 1,220,455 - SM_b20986 0.88 -2.1 1,220,553 - -0.3 1,220,738 + -0.8 1,220,738 + -0.0 1,220,738 + +0.6 1,220,738 + -3.4 1,220,738 + -0.6 1,220,739 - +0.7 1,220,921 + SM_b20987 0.12 -0.5 1,220,922 - SM_b20987 0.12 -1.0 1,221,408 + SM_b20987 0.57 -2.8 1,221,408 + SM_b20987 0.57 -2.1 1,221,977 + SM_b20988 0.16 +0.6 1,221,977 + SM_b20988 0.16 +0.3 1,221,978 - SM_b20988 0.16 +0.1 1,221,978 - SM_b20988 0.16 -1.2 1,221,978 - SM_b20988 0.16 -0.4 1,222,122 + SM_b20988 0.46 -0.3 1,222,122 + SM_b20988 0.46 +0.9 1,222,184 + SM_b20988 0.59 -0.8 1,222,251 + SM_b20988 0.72 +0.5 1,222,251 + SM_b20988 0.72 -0.6 1,222,251 + SM_b20988 0.72 -0.6 1,222,251 + SM_b20988 0.72 +0.5 1,222,251 + SM_b20988 0.72 -2.2 1,222,251 + SM_b20988 0.72 +0.2 1,222,252 - SM_b20988 0.73 +0.0 1,222,252 - SM_b20988 0.73 +1.4 1,222,252 - SM_b20988 0.73 +1.2 1,222,347 + -0.8 1,222,348 - -0.1 1,222,354 - +0.9 1,222,472 - -1.0 1,222,472 - -0.9 1,222,472 - -2.7 1,222,587 - -1.5 1,222,616 + +0.6 1,222,617 - -1.3 1,222,631 - -0.4
Or see this region's nucleotide sequence