Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20852 and SM_b20853 are separated by 43 nucleotides SM_b20853 and SM_b20854 are separated by 177 nucleotides
SM_b20852: SM_b20852 - sugar kinase, at 1,255,541 to 1,257,070
_b20852
SM_b20853: SM_b20853 - sugar-alcohol dehydrogenase, at 1,257,114 to 1,258,133
_b20853
SM_b20854: SM_b20854 - sugar uptake ABC transporter permease, at 1,258,311 to 1,259,306
_b20854
Position (kb)
1257
1258
1259 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1256.242 kb on + strand, within SM_b20852 at 1256.245 kb on + strand, within SM_b20852 at 1256.245 kb on + strand, within SM_b20852 at 1256.246 kb on - strand, within SM_b20852 at 1256.344 kb on + strand, within SM_b20852 at 1256.345 kb on - strand, within SM_b20852 at 1256.345 kb on - strand, within SM_b20852 at 1256.354 kb on + strand, within SM_b20852 at 1256.354 kb on + strand, within SM_b20852 at 1256.355 kb on - strand, within SM_b20852 at 1256.398 kb on + strand, within SM_b20852 at 1256.398 kb on + strand, within SM_b20852 at 1256.398 kb on + strand, within SM_b20852 at 1256.399 kb on - strand, within SM_b20852 at 1256.399 kb on - strand, within SM_b20852 at 1256.399 kb on - strand, within SM_b20852 at 1256.399 kb on - strand, within SM_b20852 at 1256.496 kb on + strand, within SM_b20852 at 1256.497 kb on - strand, within SM_b20852 at 1256.532 kb on + strand, within SM_b20852 at 1256.532 kb on + strand, within SM_b20852 at 1256.532 kb on + strand, within SM_b20852 at 1256.532 kb on + strand, within SM_b20852 at 1256.533 kb on - strand, within SM_b20852 at 1256.533 kb on - strand, within SM_b20852 at 1256.533 kb on - strand, within SM_b20852 at 1256.574 kb on - strand, within SM_b20852 at 1256.582 kb on + strand, within SM_b20852 at 1256.820 kb on - strand, within SM_b20852 at 1256.820 kb on - strand, within SM_b20852 at 1256.971 kb on - strand at 1257.180 kb on + strand at 1257.181 kb on - strand at 1257.181 kb on - strand at 1257.375 kb on + strand, within SM_b20853 at 1257.376 kb on - strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.510 kb on + strand, within SM_b20853 at 1257.511 kb on - strand, within SM_b20853 at 1257.511 kb on - strand, within SM_b20853 at 1257.511 kb on - strand, within SM_b20853 at 1257.511 kb on - strand, within SM_b20853 at 1257.511 kb on - strand, within SM_b20853 at 1257.511 kb on - strand, within SM_b20853 at 1257.511 kb on - strand, within SM_b20853 at 1257.660 kb on + strand, within SM_b20853 at 1257.660 kb on + strand, within SM_b20853 at 1257.663 kb on - strand, within SM_b20853 at 1257.787 kb on + strand, within SM_b20853 at 1257.814 kb on + strand, within SM_b20853 at 1257.814 kb on + strand, within SM_b20853 at 1257.814 kb on + strand, within SM_b20853 at 1257.814 kb on + strand, within SM_b20853 at 1257.815 kb on - strand, within SM_b20853 at 1257.815 kb on - strand, within SM_b20853 at 1257.815 kb on - strand, within SM_b20853 at 1257.858 kb on + strand, within SM_b20853 at 1257.858 kb on + strand, within SM_b20853 at 1257.858 kb on + strand, within SM_b20853 at 1257.859 kb on - strand, within SM_b20853 at 1257.890 kb on + strand, within SM_b20853 at 1258.146 kb on + strand at 1258.147 kb on - strand at 1258.166 kb on + strand at 1258.166 kb on + strand at 1258.167 kb on - strand at 1258.175 kb on + strand at 1258.264 kb on - strand at 1258.264 kb on - strand at 1258.264 kb on - strand at 1258.264 kb on - strand at 1258.278 kb on - strand at 1258.284 kb on + strand at 1258.284 kb on + strand at 1258.292 kb on + strand at 1258.374 kb on - strand at 1258.374 kb on - strand at 1258.375 kb on + strand at 1258.375 kb on + strand at 1258.375 kb on + strand at 1258.375 kb on + strand at 1258.375 kb on + strand at 1258.376 kb on - strand at 1258.427 kb on + strand, within SM_b20854 at 1258.428 kb on - strand, within SM_b20854 at 1258.428 kb on - strand, within SM_b20854 at 1258.584 kb on - strand, within SM_b20854 at 1258.584 kb on - strand, within SM_b20854 at 1258.584 kb on - strand, within SM_b20854 at 1258.584 kb on - strand, within SM_b20854 at 1258.618 kb on + strand, within SM_b20854 at 1258.618 kb on + strand, within SM_b20854 at 1258.631 kb on + strand, within SM_b20854 at 1258.631 kb on + strand, within SM_b20854 at 1258.633 kb on + strand, within SM_b20854 at 1258.634 kb on - strand, within SM_b20854 at 1258.691 kb on + strand, within SM_b20854 at 1258.741 kb on + strand, within SM_b20854 at 1258.742 kb on - strand, within SM_b20854 at 1258.742 kb on - strand, within SM_b20854 at 1258.742 kb on - strand, within SM_b20854 at 1258.742 kb on - strand, within SM_b20854 at 1258.742 kb on - strand, within SM_b20854 at 1258.743 kb on + strand, within SM_b20854 at 1258.921 kb on + strand, within SM_b20854 at 1258.921 kb on + strand, within SM_b20854 at 1258.922 kb on - strand, within SM_b20854 at 1259.004 kb on + strand, within SM_b20854 at 1259.004 kb on + strand, within SM_b20854
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,256,242 + SM_b20852 0.46 -2.0 1,256,245 + SM_b20852 0.46 -1.7 1,256,245 + SM_b20852 0.46 -1.1 1,256,246 - SM_b20852 0.46 +1.1 1,256,344 + SM_b20852 0.52 -0.8 1,256,345 - SM_b20852 0.53 -1.3 1,256,345 - SM_b20852 0.53 +0.6 1,256,354 + SM_b20852 0.53 +1.5 1,256,354 + SM_b20852 0.53 -0.7 1,256,355 - SM_b20852 0.53 -0.7 1,256,398 + SM_b20852 0.56 +1.2 1,256,398 + SM_b20852 0.56 +0.6 1,256,398 + SM_b20852 0.56 -1.7 1,256,399 - SM_b20852 0.56 -1.8 1,256,399 - SM_b20852 0.56 -1.0 1,256,399 - SM_b20852 0.56 -0.1 1,256,399 - SM_b20852 0.56 +0.4 1,256,496 + SM_b20852 0.62 +0.1 1,256,497 - SM_b20852 0.62 +0.1 1,256,532 + SM_b20852 0.65 +0.9 1,256,532 + SM_b20852 0.65 -0.2 1,256,532 + SM_b20852 0.65 -2.2 1,256,532 + SM_b20852 0.65 +0.7 1,256,533 - SM_b20852 0.65 -1.4 1,256,533 - SM_b20852 0.65 +2.7 1,256,533 - SM_b20852 0.65 +1.2 1,256,574 - SM_b20852 0.68 -0.7 1,256,582 + SM_b20852 0.68 +3.2 1,256,820 - SM_b20852 0.84 -0.4 1,256,820 - SM_b20852 0.84 +0.1 1,256,971 - +0.2 1,257,180 + -1.8 1,257,181 - +0.0 1,257,181 - -0.9 1,257,375 + SM_b20853 0.26 -0.2 1,257,376 - SM_b20853 0.26 -0.5 1,257,510 + SM_b20853 0.39 -1.8 1,257,510 + SM_b20853 0.39 +0.8 1,257,510 + SM_b20853 0.39 -0.7 1,257,510 + SM_b20853 0.39 -1.2 1,257,510 + SM_b20853 0.39 -1.9 1,257,510 + SM_b20853 0.39 -0.1 1,257,510 + SM_b20853 0.39 -0.6 1,257,510 + SM_b20853 0.39 -2.4 1,257,511 - SM_b20853 0.39 +1.1 1,257,511 - SM_b20853 0.39 +0.5 1,257,511 - SM_b20853 0.39 +0.4 1,257,511 - SM_b20853 0.39 -1.7 1,257,511 - SM_b20853 0.39 -0.0 1,257,511 - SM_b20853 0.39 -1.0 1,257,511 - SM_b20853 0.39 +0.8 1,257,660 + SM_b20853 0.54 -0.7 1,257,660 + SM_b20853 0.54 -0.6 1,257,663 - SM_b20853 0.54 -0.1 1,257,787 + SM_b20853 0.66 -0.6 1,257,814 + SM_b20853 0.69 -0.6 1,257,814 + SM_b20853 0.69 -0.3 1,257,814 + SM_b20853 0.69 +1.8 1,257,814 + SM_b20853 0.69 -0.9 1,257,815 - SM_b20853 0.69 -1.3 1,257,815 - SM_b20853 0.69 +1.1 1,257,815 - SM_b20853 0.69 -0.2 1,257,858 + SM_b20853 0.73 -0.4 1,257,858 + SM_b20853 0.73 -0.0 1,257,858 + SM_b20853 0.73 +0.2 1,257,859 - SM_b20853 0.73 +0.5 1,257,890 + SM_b20853 0.76 +0.4 1,258,146 + +1.1 1,258,147 - +1.2 1,258,166 + -1.2 1,258,166 + +0.6 1,258,167 - -0.8 1,258,175 + +1.1 1,258,264 - -1.0 1,258,264 - +0.1 1,258,264 - +0.5 1,258,264 - +1.0 1,258,278 - +0.6 1,258,284 + +0.0 1,258,284 + -2.3 1,258,292 + +0.5 1,258,374 - -0.6 1,258,374 - -2.4 1,258,375 + +0.3 1,258,375 + +0.0 1,258,375 + -1.5 1,258,375 + +0.8 1,258,375 + +0.3 1,258,376 - +0.6 1,258,427 + SM_b20854 0.12 -0.1 1,258,428 - SM_b20854 0.12 +0.1 1,258,428 - SM_b20854 0.12 +0.6 1,258,584 - SM_b20854 0.27 -1.9 1,258,584 - SM_b20854 0.27 +0.2 1,258,584 - SM_b20854 0.27 +0.3 1,258,584 - SM_b20854 0.27 +1.6 1,258,618 + SM_b20854 0.31 +0.5 1,258,618 + SM_b20854 0.31 +0.6 1,258,631 + SM_b20854 0.32 +1.0 1,258,631 + SM_b20854 0.32 -0.4 1,258,633 + SM_b20854 0.32 -0.5 1,258,634 - SM_b20854 0.32 +1.0 1,258,691 + SM_b20854 0.38 +0.5 1,258,741 + SM_b20854 0.43 +0.7 1,258,742 - SM_b20854 0.43 -1.0 1,258,742 - SM_b20854 0.43 -0.3 1,258,742 - SM_b20854 0.43 +0.4 1,258,742 - SM_b20854 0.43 +1.1 1,258,742 - SM_b20854 0.43 -0.1 1,258,743 + SM_b20854 0.43 -1.2 1,258,921 + SM_b20854 0.61 -0.6 1,258,921 + SM_b20854 0.61 -2.5 1,258,922 - SM_b20854 0.61 -0.5 1,259,004 + SM_b20854 0.70 -0.3 1,259,004 + SM_b20854 0.70 -1.4
Or see this region's nucleotide sequence