Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20748 and SM_b20749 are separated by 506 nucleotides SM_b20749 and SM_b20750 are separated by 19 nucleotides SM_b20750 and SM_b20751 are separated by 30 nucleotides
SM_b20748: SM_b20748 - glycosyltransferase, at 1,536,505 to 1,537,569
_b20748
SM_b20749: SM_b20749 - D-mannonate oxidoreductase, at 1,538,076 to 1,539,539
_b20749
SM_b20750: SM_b20750 - dehydrogenase, at 1,539,559 to 1,540,308
_b20750
SM_b20751: SM_b20751 - 3-hydroxyisobutyrate dehydrogenase, at 1,540,339 to 1,541,235
_b20751
Position (kb)
1538
1539
1540 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1537.103 kb on + strand, within SM_b20748 at 1537.275 kb on - strand, within SM_b20748 at 1537.280 kb on + strand, within SM_b20748 at 1537.280 kb on + strand, within SM_b20748 at 1537.281 kb on - strand, within SM_b20748 at 1537.281 kb on - strand, within SM_b20748 at 1537.442 kb on - strand, within SM_b20748 at 1537.467 kb on - strand at 1537.514 kb on + strand at 1537.515 kb on - strand at 1537.867 kb on + strand at 1537.867 kb on + strand at 1537.867 kb on + strand at 1537.867 kb on + strand at 1537.867 kb on + strand at 1537.867 kb on + strand at 1537.867 kb on + strand at 1537.869 kb on + strand at 1537.869 kb on + strand at 1537.869 kb on + strand at 1537.931 kb on - strand at 1538.133 kb on + strand at 1538.134 kb on - strand at 1538.208 kb on + strand at 1538.209 kb on - strand at 1538.310 kb on + strand, within SM_b20749 at 1538.310 kb on + strand, within SM_b20749 at 1538.466 kb on + strand, within SM_b20749 at 1538.466 kb on + strand, within SM_b20749 at 1538.467 kb on - strand, within SM_b20749 at 1538.630 kb on + strand, within SM_b20749 at 1538.664 kb on - strand, within SM_b20749 at 1538.979 kb on + strand, within SM_b20749 at 1538.980 kb on - strand, within SM_b20749 at 1539.118 kb on - strand, within SM_b20749 at 1539.537 kb on + strand at 1540.015 kb on + strand, within SM_b20750 at 1540.018 kb on - strand, within SM_b20750 at 1540.235 kb on + strand at 1540.430 kb on + strand, within SM_b20751 at 1540.430 kb on + strand, within SM_b20751
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,537,103 + SM_b20748 0.56 -1.0 1,537,275 - SM_b20748 0.72 +0.3 1,537,280 + SM_b20748 0.73 -1.5 1,537,280 + SM_b20748 0.73 +0.5 1,537,281 - SM_b20748 0.73 +1.0 1,537,281 - SM_b20748 0.73 +0.9 1,537,442 - SM_b20748 0.88 +0.6 1,537,467 - +0.4 1,537,514 + -0.3 1,537,515 - -1.4 1,537,867 + +0.0 1,537,867 + +1.2 1,537,867 + +0.7 1,537,867 + -0.0 1,537,867 + +0.3 1,537,867 + -1.4 1,537,867 + -0.1 1,537,869 + +0.2 1,537,869 + -1.4 1,537,869 + +1.2 1,537,931 - -2.4 1,538,133 + -0.4 1,538,134 - +1.3 1,538,208 + -0.8 1,538,209 - +0.3 1,538,310 + SM_b20749 0.16 +1.2 1,538,310 + SM_b20749 0.16 -0.5 1,538,466 + SM_b20749 0.27 +0.1 1,538,466 + SM_b20749 0.27 +2.0 1,538,467 - SM_b20749 0.27 +0.0 1,538,630 + SM_b20749 0.38 +0.9 1,538,664 - SM_b20749 0.40 +1.6 1,538,979 + SM_b20749 0.62 -0.1 1,538,980 - SM_b20749 0.62 +0.5 1,539,118 - SM_b20749 0.71 -1.4 1,539,537 + -0.1 1,540,015 + SM_b20750 0.61 -1.5 1,540,018 - SM_b20750 0.61 -0.6 1,540,235 + -0.4 1,540,430 + SM_b20751 0.10 +0.1 1,540,430 + SM_b20751 0.10 +2.0
Or see this region's nucleotide sequence