Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20584 and SM_b20585 are separated by 209 nucleotides SM_b20585 and SM_b20586 are separated by 122 nucleotides
SM_b20584: SM_b20584 - hypothetical protein, at 1,598,712 to 1,599,374
_b20584
SM_b20585: SM_b20585 - gamma-glutamyltranspeptidase, at 1,599,584 to 1,601,329
_b20585
SM_b20586: SM_b20586 - IclR family transcriptional regulator, at 1,601,452 to 1,602,207
_b20586
Position (kb)
1599
1600
1601
1602 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1598.609 kb on + strand at 1598.614 kb on + strand at 1598.615 kb on - strand at 1598.637 kb on - strand at 1599.022 kb on - strand, within SM_b20584 at 1599.044 kb on - strand, within SM_b20584 at 1599.044 kb on - strand, within SM_b20584 at 1599.093 kb on + strand, within SM_b20584 at 1599.093 kb on + strand, within SM_b20584 at 1599.093 kb on + strand, within SM_b20584 at 1599.094 kb on - strand, within SM_b20584 at 1599.094 kb on - strand, within SM_b20584 at 1599.120 kb on + strand, within SM_b20584 at 1599.360 kb on + strand at 1599.361 kb on - strand at 1599.470 kb on + strand at 1599.471 kb on - strand at 1599.510 kb on + strand at 1599.610 kb on - strand at 1599.638 kb on - strand at 1599.810 kb on - strand, within SM_b20585 at 1599.926 kb on + strand, within SM_b20585 at 1599.927 kb on - strand, within SM_b20585 at 1599.927 kb on - strand, within SM_b20585 at 1599.927 kb on - strand, within SM_b20585 at 1600.031 kb on + strand, within SM_b20585 at 1600.277 kb on + strand, within SM_b20585 at 1600.277 kb on + strand, within SM_b20585 at 1600.277 kb on + strand, within SM_b20585 at 1600.277 kb on + strand, within SM_b20585 at 1600.277 kb on + strand, within SM_b20585 at 1600.278 kb on - strand, within SM_b20585 at 1600.359 kb on - strand, within SM_b20585 at 1600.395 kb on - strand, within SM_b20585 at 1600.491 kb on - strand, within SM_b20585 at 1600.491 kb on - strand, within SM_b20585 at 1600.499 kb on + strand, within SM_b20585 at 1600.500 kb on - strand, within SM_b20585 at 1600.550 kb on + strand, within SM_b20585 at 1600.550 kb on + strand, within SM_b20585 at 1600.550 kb on + strand, within SM_b20585 at 1600.551 kb on - strand, within SM_b20585 at 1600.551 kb on - strand, within SM_b20585 at 1600.625 kb on + strand, within SM_b20585 at 1600.625 kb on + strand, within SM_b20585 at 1600.767 kb on - strand, within SM_b20585 at 1600.767 kb on - strand, within SM_b20585 at 1600.875 kb on - strand, within SM_b20585 at 1601.126 kb on + strand, within SM_b20585 at 1601.126 kb on + strand, within SM_b20585 at 1601.802 kb on - strand, within SM_b20586 at 1601.871 kb on - strand, within SM_b20586 at 1601.942 kb on + strand, within SM_b20586 at 1601.943 kb on - strand, within SM_b20586 at 1601.943 kb on - strand, within SM_b20586 at 1601.955 kb on + strand, within SM_b20586 at 1601.981 kb on + strand, within SM_b20586 at 1601.982 kb on - strand, within SM_b20586 at 1601.982 kb on - strand, within SM_b20586 at 1601.982 kb on - strand, within SM_b20586 at 1602.211 kb on - strand at 1602.307 kb on + strand at 1602.307 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,598,609 + -1.2 1,598,614 + -0.1 1,598,615 - -1.4 1,598,637 - -1.0 1,599,022 - SM_b20584 0.47 +1.4 1,599,044 - SM_b20584 0.50 -0.2 1,599,044 - SM_b20584 0.50 +0.7 1,599,093 + SM_b20584 0.57 -1.7 1,599,093 + SM_b20584 0.57 -0.1 1,599,093 + SM_b20584 0.57 -1.8 1,599,094 - SM_b20584 0.58 -0.7 1,599,094 - SM_b20584 0.58 +1.1 1,599,120 + SM_b20584 0.62 -0.2 1,599,360 + -1.4 1,599,361 - +0.8 1,599,470 + +0.8 1,599,471 - -0.7 1,599,510 + -0.3 1,599,610 - +1.2 1,599,638 - +1.5 1,599,810 - SM_b20585 0.13 -0.4 1,599,926 + SM_b20585 0.20 -0.2 1,599,927 - SM_b20585 0.20 +0.1 1,599,927 - SM_b20585 0.20 -0.6 1,599,927 - SM_b20585 0.20 +0.6 1,600,031 + SM_b20585 0.26 +1.0 1,600,277 + SM_b20585 0.40 -0.4 1,600,277 + SM_b20585 0.40 +0.6 1,600,277 + SM_b20585 0.40 +0.5 1,600,277 + SM_b20585 0.40 +1.0 1,600,277 + SM_b20585 0.40 -0.1 1,600,278 - SM_b20585 0.40 +0.6 1,600,359 - SM_b20585 0.44 +0.8 1,600,395 - SM_b20585 0.46 -0.1 1,600,491 - SM_b20585 0.52 +0.9 1,600,491 - SM_b20585 0.52 -2.5 1,600,499 + SM_b20585 0.52 -1.2 1,600,500 - SM_b20585 0.52 -0.4 1,600,550 + SM_b20585 0.55 +0.6 1,600,550 + SM_b20585 0.55 +0.6 1,600,550 + SM_b20585 0.55 +0.3 1,600,551 - SM_b20585 0.55 +0.3 1,600,551 - SM_b20585 0.55 -0.4 1,600,625 + SM_b20585 0.60 +0.4 1,600,625 + SM_b20585 0.60 -1.0 1,600,767 - SM_b20585 0.68 +0.7 1,600,767 - SM_b20585 0.68 +1.5 1,600,875 - SM_b20585 0.74 +0.8 1,601,126 + SM_b20585 0.88 -0.3 1,601,126 + SM_b20585 0.88 -3.0 1,601,802 - SM_b20586 0.46 -3.7 1,601,871 - SM_b20586 0.55 +0.5 1,601,942 + SM_b20586 0.65 -0.2 1,601,943 - SM_b20586 0.65 -2.3 1,601,943 - SM_b20586 0.65 -1.0 1,601,955 + SM_b20586 0.67 -0.3 1,601,981 + SM_b20586 0.70 -0.1 1,601,982 - SM_b20586 0.70 -1.7 1,601,982 - SM_b20586 0.70 -0.2 1,601,982 - SM_b20586 0.70 -0.0 1,602,211 - -0.2 1,602,307 + -1.0 1,602,307 + -0.4
Or see this region's nucleotide sequence