Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20582 and SM_b20583 are separated by 91 nucleotides SM_b20583 and SM_b20584 are separated by 172 nucleotides
SM_b20582: SM_b20582 - LysR family transcriptional regulator, at 1,596,355 to 1,597,275
_b20582
SM_b20583: SM_b20583 - 4-hydroxybenzoate 3-monooxygenase, at 1,597,367 to 1,598,539
_b20583
SM_b20584: SM_b20584 - hypothetical protein, at 1,598,712 to 1,599,374
_b20584
Position (kb)
1597
1598
1599 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1596.434 kb on + strand at 1596.435 kb on - strand at 1596.435 kb on - strand at 1596.471 kb on - strand, within SM_b20582 at 1596.471 kb on - strand, within SM_b20582 at 1596.471 kb on - strand, within SM_b20582 at 1596.661 kb on + strand, within SM_b20582 at 1596.661 kb on + strand, within SM_b20582 at 1596.827 kb on + strand, within SM_b20582 at 1596.827 kb on + strand, within SM_b20582 at 1596.828 kb on - strand, within SM_b20582 at 1596.828 kb on - strand, within SM_b20582 at 1596.866 kb on + strand, within SM_b20582 at 1596.867 kb on - strand, within SM_b20582 at 1597.106 kb on + strand, within SM_b20582 at 1597.107 kb on - strand, within SM_b20582 at 1597.164 kb on + strand, within SM_b20582 at 1597.165 kb on - strand, within SM_b20582 at 1597.165 kb on - strand, within SM_b20582 at 1597.165 kb on - strand, within SM_b20582 at 1597.266 kb on + strand at 1597.267 kb on - strand at 1597.387 kb on - strand at 1597.431 kb on + strand at 1597.432 kb on - strand at 1597.432 kb on - strand at 1597.432 kb on - strand at 1597.432 kb on - strand at 1597.590 kb on + strand, within SM_b20583 at 1597.617 kb on + strand, within SM_b20583 at 1597.618 kb on - strand, within SM_b20583 at 1597.618 kb on - strand, within SM_b20583 at 1597.672 kb on + strand, within SM_b20583 at 1597.875 kb on + strand, within SM_b20583 at 1597.875 kb on + strand, within SM_b20583 at 1597.875 kb on + strand, within SM_b20583 at 1597.876 kb on - strand, within SM_b20583 at 1597.876 kb on - strand, within SM_b20583 at 1597.878 kb on + strand, within SM_b20583 at 1597.879 kb on - strand, within SM_b20583 at 1597.938 kb on + strand, within SM_b20583 at 1597.939 kb on - strand, within SM_b20583 at 1597.939 kb on - strand, within SM_b20583 at 1597.939 kb on - strand, within SM_b20583 at 1598.241 kb on + strand, within SM_b20583 at 1598.241 kb on + strand, within SM_b20583 at 1598.241 kb on + strand, within SM_b20583 at 1598.242 kb on - strand, within SM_b20583 at 1598.452 kb on + strand at 1598.453 kb on - strand at 1598.453 kb on - strand at 1598.609 kb on + strand at 1598.614 kb on + strand at 1598.615 kb on - strand at 1598.637 kb on - strand at 1599.022 kb on - strand, within SM_b20584 at 1599.044 kb on - strand, within SM_b20584 at 1599.044 kb on - strand, within SM_b20584 at 1599.093 kb on + strand, within SM_b20584 at 1599.093 kb on + strand, within SM_b20584 at 1599.093 kb on + strand, within SM_b20584 at 1599.094 kb on - strand, within SM_b20584 at 1599.094 kb on - strand, within SM_b20584 at 1599.120 kb on + strand, within SM_b20584 at 1599.360 kb on + strand at 1599.361 kb on - strand at 1599.470 kb on + strand at 1599.471 kb on - strand at 1599.510 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 1,596,434 + -0.3 1,596,435 - -0.5 1,596,435 - -1.0 1,596,471 - SM_b20582 0.13 -0.3 1,596,471 - SM_b20582 0.13 +0.3 1,596,471 - SM_b20582 0.13 +0.2 1,596,661 + SM_b20582 0.33 -0.1 1,596,661 + SM_b20582 0.33 -1.4 1,596,827 + SM_b20582 0.51 +0.5 1,596,827 + SM_b20582 0.51 -0.2 1,596,828 - SM_b20582 0.51 +1.1 1,596,828 - SM_b20582 0.51 +0.6 1,596,866 + SM_b20582 0.55 +0.7 1,596,867 - SM_b20582 0.56 +1.1 1,597,106 + SM_b20582 0.82 -0.2 1,597,107 - SM_b20582 0.82 +0.4 1,597,164 + SM_b20582 0.88 -1.6 1,597,165 - SM_b20582 0.88 +1.6 1,597,165 - SM_b20582 0.88 +0.3 1,597,165 - SM_b20582 0.88 +0.4 1,597,266 + +0.6 1,597,267 - -0.1 1,597,387 - -2.8 1,597,431 + -3.0 1,597,432 - -1.8 1,597,432 - +0.1 1,597,432 - -0.3 1,597,432 - +0.2 1,597,590 + SM_b20583 0.19 +1.6 1,597,617 + SM_b20583 0.21 -1.3 1,597,618 - SM_b20583 0.21 -2.4 1,597,618 - SM_b20583 0.21 -0.6 1,597,672 + SM_b20583 0.26 +0.3 1,597,875 + SM_b20583 0.43 +1.0 1,597,875 + SM_b20583 0.43 +2.3 1,597,875 + SM_b20583 0.43 +1.5 1,597,876 - SM_b20583 0.43 +1.2 1,597,876 - SM_b20583 0.43 +0.6 1,597,878 + SM_b20583 0.44 +0.4 1,597,879 - SM_b20583 0.44 +0.3 1,597,938 + SM_b20583 0.49 +0.2 1,597,939 - SM_b20583 0.49 -0.1 1,597,939 - SM_b20583 0.49 +0.2 1,597,939 - SM_b20583 0.49 +2.0 1,598,241 + SM_b20583 0.75 +1.4 1,598,241 + SM_b20583 0.75 +0.2 1,598,241 + SM_b20583 0.75 -0.2 1,598,242 - SM_b20583 0.75 -0.4 1,598,452 + +1.0 1,598,453 - -2.0 1,598,453 - -0.9 1,598,609 + -1.2 1,598,614 + -0.1 1,598,615 - -1.4 1,598,637 - -1.0 1,599,022 - SM_b20584 0.47 +1.4 1,599,044 - SM_b20584 0.50 -0.2 1,599,044 - SM_b20584 0.50 +0.7 1,599,093 + SM_b20584 0.57 -1.7 1,599,093 + SM_b20584 0.57 -0.1 1,599,093 + SM_b20584 0.57 -1.8 1,599,094 - SM_b20584 0.58 -0.7 1,599,094 - SM_b20584 0.58 +1.1 1,599,120 + SM_b20584 0.62 -0.2 1,599,360 + -1.4 1,599,361 - +0.8 1,599,470 + +0.8 1,599,471 - -0.7 1,599,510 + -0.3
Or see this region's nucleotide sequence