Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20394 and SM_b20395 are separated by 39 nucleotides SM_b20395 and SM_b20396 are separated by 43 nucleotides
SM_b20394: SM_b20394 - hypothetical protein, at 407,812 to 409,140
_b20394
SM_b20395: SM_b20395 - dehydrogenase, at 409,180 to 411,429
_b20395
SM_b20396: SM_b20396 - dehydrogenase, at 411,473 to 412,456
_b20396
Position (kb) 409
410
411
412 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 408.241 kb on + strand, within SM_b20394 at 408.350 kb on + strand, within SM_b20394 at 408.350 kb on + strand, within SM_b20394 at 408.351 kb on - strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.530 kb on - strand, within SM_b20394 at 408.530 kb on - strand, within SM_b20394 at 408.797 kb on - strand, within SM_b20394 at 408.946 kb on - strand, within SM_b20394 at 408.987 kb on + strand, within SM_b20394 at 408.988 kb on - strand, within SM_b20394 at 408.988 kb on - strand, within SM_b20394 at 409.041 kb on + strand at 409.109 kb on - strand at 409.183 kb on + strand at 409.273 kb on + strand at 409.274 kb on - strand at 409.311 kb on + strand at 409.311 kb on + strand at 409.311 kb on + strand at 409.311 kb on + strand at 409.311 kb on + strand at 409.312 kb on - strand at 409.312 kb on - strand at 409.334 kb on + strand at 409.334 kb on + strand at 409.334 kb on + strand at 409.379 kb on + strand at 409.694 kb on + strand, within SM_b20395 at 409.694 kb on + strand, within SM_b20395 at 409.863 kb on + strand, within SM_b20395 at 409.863 kb on + strand, within SM_b20395 at 410.079 kb on - strand, within SM_b20395 at 410.079 kb on - strand, within SM_b20395 at 410.079 kb on - strand, within SM_b20395 at 410.411 kb on + strand, within SM_b20395 at 410.412 kb on - strand, within SM_b20395 at 410.412 kb on - strand, within SM_b20395 at 410.412 kb on - strand, within SM_b20395 at 410.835 kb on + strand, within SM_b20395 at 410.843 kb on + strand, within SM_b20395 at 411.006 kb on - strand, within SM_b20395 at 411.151 kb on + strand, within SM_b20395 at 411.151 kb on + strand, within SM_b20395 at 411.208 kb on + strand at 411.209 kb on - strand at 411.211 kb on + strand at 411.212 kb on - strand at 411.212 kb on - strand at 411.294 kb on - strand at 411.451 kb on - strand at 411.451 kb on - strand at 411.474 kb on + strand at 411.474 kb on + strand at 411.475 kb on - strand at 411.475 kb on - strand at 411.747 kb on + strand, within SM_b20396 at 411.747 kb on + strand, within SM_b20396 at 411.747 kb on + strand, within SM_b20396 at 411.748 kb on - strand, within SM_b20396 at 411.748 kb on - strand, within SM_b20396 at 411.775 kb on - strand, within SM_b20396 at 411.965 kb on - strand, within SM_b20396 at 411.965 kb on - strand, within SM_b20396 at 411.965 kb on - strand, within SM_b20396 at 412.243 kb on + strand, within SM_b20396 at 412.243 kb on + strand, within SM_b20396 at 412.244 kb on - strand, within SM_b20396 at 412.244 kb on - strand, within SM_b20396 at 412.244 kb on - strand, within SM_b20396
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 408,241 + SM_b20394 0.32 +0.3 408,350 + SM_b20394 0.40 -0.2 408,350 + SM_b20394 0.40 +1.1 408,351 - SM_b20394 0.41 -0.5 408,529 + SM_b20394 0.54 +1.2 408,529 + SM_b20394 0.54 +1.2 408,529 + SM_b20394 0.54 +0.1 408,529 + SM_b20394 0.54 -2.5 408,529 + SM_b20394 0.54 +2.1 408,529 + SM_b20394 0.54 -0.8 408,530 - SM_b20394 0.54 +0.5 408,530 - SM_b20394 0.54 +1.1 408,797 - SM_b20394 0.74 +0.0 408,946 - SM_b20394 0.85 -0.4 408,987 + SM_b20394 0.88 -0.2 408,988 - SM_b20394 0.88 -0.5 408,988 - SM_b20394 0.88 +0.1 409,041 + -0.4 409,109 - +0.0 409,183 + +0.3 409,273 + +0.6 409,274 - -0.4 409,311 + -0.3 409,311 + -3.1 409,311 + -0.8 409,311 + -0.1 409,311 + -0.9 409,312 - +2.1 409,312 - +0.5 409,334 + +0.4 409,334 + -0.6 409,334 + +0.2 409,379 + -0.1 409,694 + SM_b20395 0.23 -0.3 409,694 + SM_b20395 0.23 +1.0 409,863 + SM_b20395 0.30 -1.5 409,863 + SM_b20395 0.30 +0.1 410,079 - SM_b20395 0.40 +1.1 410,079 - SM_b20395 0.40 -0.2 410,079 - SM_b20395 0.40 +1.2 410,411 + SM_b20395 0.55 -1.0 410,412 - SM_b20395 0.55 +0.9 410,412 - SM_b20395 0.55 -1.5 410,412 - SM_b20395 0.55 +0.1 410,835 + SM_b20395 0.74 +0.2 410,843 + SM_b20395 0.74 +1.0 411,006 - SM_b20395 0.81 +2.7 411,151 + SM_b20395 0.88 +0.0 411,151 + SM_b20395 0.88 +0.5 411,208 + +0.8 411,209 - +1.6 411,211 + +0.1 411,212 - +0.3 411,212 - +0.4 411,294 - +0.4 411,451 - -0.6 411,451 - -0.6 411,474 + +0.3 411,474 + +0.5 411,475 - -0.2 411,475 - +0.8 411,747 + SM_b20396 0.28 -0.6 411,747 + SM_b20396 0.28 -0.5 411,747 + SM_b20396 0.28 -0.2 411,748 - SM_b20396 0.28 +0.8 411,748 - SM_b20396 0.28 +0.7 411,775 - SM_b20396 0.31 -0.3 411,965 - SM_b20396 0.50 +0.6 411,965 - SM_b20396 0.50 -2.3 411,965 - SM_b20396 0.50 +0.1 412,243 + SM_b20396 0.78 +1.1 412,243 + SM_b20396 0.78 -0.2 412,244 - SM_b20396 0.78 +0.3 412,244 - SM_b20396 0.78 -1.2 412,244 - SM_b20396 0.78 +1.1
Or see this region's nucleotide sequence