Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20269 and SM_b20270 are separated by 50 nucleotides SM_b20270 and SM_b20271 are separated by 83 nucleotides SM_b20271 and SM_b20272 are separated by 400 nucleotides
SM_b20269: SM_b20269 - hypothetical protein, at 273,692 to 275,383
_b20269
SM_b20270: SM_b20270 - proline racemase, at 275,434 to 276,462
_b20270
SM_b20271: SM_b20271 - hypothetical protein, at 276,546 to 276,977
_b20271
SM_b20272: SM_b20272 - transporter protein, at 277,378 to 278,586
_b20272
Position (kb) 275
276
277 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 274.457 kb on + strand, within SM_b20269 at 274.457 kb on + strand, within SM_b20269 at 274.696 kb on - strand, within SM_b20269 at 274.696 kb on - strand, within SM_b20269 at 275.007 kb on + strand, within SM_b20269 at 275.233 kb on + strand at 275.264 kb on + strand at 275.264 kb on + strand at 275.264 kb on + strand at 275.265 kb on - strand at 275.265 kb on - strand at 275.265 kb on - strand at 275.302 kb on - strand at 275.302 kb on - strand at 275.689 kb on - strand, within SM_b20270 at 275.847 kb on + strand, within SM_b20270 at 275.848 kb on - strand, within SM_b20270 at 275.848 kb on - strand, within SM_b20270 at 276.378 kb on + strand at 276.641 kb on + strand, within SM_b20271 at 277.087 kb on + strand at 277.088 kb on - strand at 277.265 kb on + strand at 277.265 kb on + strand at 277.266 kb on - strand at 277.266 kb on - strand at 277.394 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 274,457 + SM_b20269 0.45 +0.6 274,457 + SM_b20269 0.45 +0.4 274,696 - SM_b20269 0.59 -0.1 274,696 - SM_b20269 0.59 +0.2 275,007 + SM_b20269 0.78 -0.2 275,233 + +2.8 275,264 + -0.3 275,264 + +0.4 275,264 + -0.7 275,265 - -1.0 275,265 - -2.7 275,265 - -1.4 275,302 - -1.1 275,302 - +0.0 275,689 - SM_b20270 0.25 +1.3 275,847 + SM_b20270 0.40 +0.7 275,848 - SM_b20270 0.40 +0.4 275,848 - SM_b20270 0.40 -0.7 276,378 + -0.3 276,641 + SM_b20271 0.22 +0.3 277,087 + +0.7 277,088 - -0.1 277,265 + +0.5 277,265 + +0.0 277,266 - +0.7 277,266 - -0.0 277,394 - -0.2
Or see this region's nucleotide sequence