Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20247 and SM_b20248 are separated by 29 nucleotides SM_b20248 and SM_b20249 are separated by 151 nucleotides
SM_b20247: SM_b20247 - oxidoreductase, at 252,295 to 253,308
_b20247
SM_b20248: SM_b20248 - hypothetical protein, at 253,338 to 255,086
_b20248
SM_b20249: SM_b20249 - myo-inositol-1-phosphate synthase, at 255,238 to 256,341
_b20249
Position (kb) 253
254
255
256 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 252.697 kb on + strand, within SM_b20247 at 252.698 kb on - strand, within SM_b20247 at 252.787 kb on + strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.973 kb on + strand, within SM_b20247 at 253.075 kb on + strand, within SM_b20247 at 253.075 kb on + strand, within SM_b20247 at 253.076 kb on - strand, within SM_b20247 at 253.101 kb on + strand, within SM_b20247 at 253.121 kb on - strand, within SM_b20247 at 253.297 kb on + strand at 253.307 kb on - strand at 253.340 kb on - strand at 253.340 kb on - strand at 253.375 kb on + strand at 253.465 kb on + strand at 253.891 kb on + strand, within SM_b20248 at 254.179 kb on - strand, within SM_b20248 at 254.687 kb on - strand, within SM_b20248 at 254.707 kb on + strand, within SM_b20248 at 254.708 kb on - strand, within SM_b20248 at 254.708 kb on - strand, within SM_b20248 at 254.708 kb on - strand, within SM_b20248 at 255.040 kb on - strand at 255.079 kb on - strand at 255.079 kb on - strand at 255.079 kb on - strand at 255.211 kb on + strand at 255.211 kb on + strand at 255.211 kb on + strand at 255.212 kb on - strand at 255.212 kb on - strand at 255.212 kb on - strand at 255.212 kb on - strand at 255.212 kb on - strand at 255.212 kb on - strand at 255.216 kb on - strand at 255.316 kb on + strand at 255.317 kb on - strand at 255.317 kb on - strand at 255.457 kb on + strand, within SM_b20249 at 255.458 kb on - strand, within SM_b20249 at 255.640 kb on + strand, within SM_b20249 at 255.641 kb on - strand, within SM_b20249 at 255.676 kb on + strand, within SM_b20249 at 255.801 kb on - strand, within SM_b20249 at 255.872 kb on + strand, within SM_b20249 at 255.873 kb on - strand, within SM_b20249 at 255.873 kb on - strand, within SM_b20249 at 255.884 kb on - strand, within SM_b20249 at 255.906 kb on + strand, within SM_b20249 at 256.067 kb on - strand, within SM_b20249 at 256.067 kb on - strand, within SM_b20249 at 256.068 kb on + strand, within SM_b20249
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 252,697 + SM_b20247 0.40 -0.6 252,698 - SM_b20247 0.40 -0.4 252,787 + SM_b20247 0.49 -0.0 252,879 - SM_b20247 0.58 +0.2 252,879 - SM_b20247 0.58 +0.2 252,879 - SM_b20247 0.58 +0.1 252,973 + SM_b20247 0.67 -1.5 253,075 + SM_b20247 0.77 +0.1 253,075 + SM_b20247 0.77 -0.3 253,076 - SM_b20247 0.77 +0.4 253,101 + SM_b20247 0.79 -0.2 253,121 - SM_b20247 0.81 +0.0 253,297 + +1.6 253,307 - -0.4 253,340 - +2.9 253,340 - -0.6 253,375 + -3.3 253,465 + -3.9 253,891 + SM_b20248 0.32 +0.8 254,179 - SM_b20248 0.48 -0.8 254,687 - SM_b20248 0.77 +0.7 254,707 + SM_b20248 0.78 -0.4 254,708 - SM_b20248 0.78 +1.0 254,708 - SM_b20248 0.78 -0.2 254,708 - SM_b20248 0.78 -0.2 255,040 - -0.3 255,079 - -0.4 255,079 - -2.0 255,079 - -1.6 255,211 + -1.8 255,211 + -0.1 255,211 + +0.9 255,212 - -1.3 255,212 - -1.1 255,212 - +1.2 255,212 - -0.0 255,212 - -1.0 255,212 - -0.6 255,216 - +0.2 255,316 + +0.4 255,317 - +0.4 255,317 - -0.9 255,457 + SM_b20249 0.20 -1.8 255,458 - SM_b20249 0.20 -0.0 255,640 + SM_b20249 0.36 +1.2 255,641 - SM_b20249 0.37 -1.7 255,676 + SM_b20249 0.40 -1.4 255,801 - SM_b20249 0.51 -0.4 255,872 + SM_b20249 0.57 +0.8 255,873 - SM_b20249 0.58 -1.8 255,873 - SM_b20249 0.58 +0.4 255,884 - SM_b20249 0.59 -0.2 255,906 + SM_b20249 0.61 -1.6 256,067 - SM_b20249 0.75 +2.0 256,067 - SM_b20249 0.75 -0.7 256,068 + SM_b20249 0.75 +0.0
Or see this region's nucleotide sequence