Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20092 and SM_b20093 are separated by 37 nucleotides SM_b20093 and SM_b20094 overlap by 106 nucleotides SM_b20094 and SM_b20095 are separated by 24 nucleotides
SM_b20092: SM_b20092 - hypothetical protein, at 99,778 to 100,536
_b20092
SM_b20093: SM_b20093 - hypothetical protein, at 100,574 to 101,515
_b20093
SM_b20094: SM_b20094 - phospholipase, at 101,410 to 103,182
_b20094
SM_b20095: SM_b20095 - pyruvate oxidase, at 103,207 to 105,024
_b20095
Position (kb) 101
102
103
104 Strain fitness (log2 ratio) -2
-1
0
1 at 100.487 kb on + strand at 100.641 kb on - strand at 100.661 kb on - strand at 100.742 kb on + strand, within SM_b20093 at 100.742 kb on + strand, within SM_b20093 at 100.743 kb on - strand, within SM_b20093 at 101.094 kb on - strand, within SM_b20093 at 101.282 kb on + strand, within SM_b20093 at 101.282 kb on + strand, within SM_b20093 at 101.283 kb on - strand, within SM_b20093 at 101.283 kb on - strand, within SM_b20093 at 101.283 kb on - strand, within SM_b20093 at 101.411 kb on + strand at 101.641 kb on + strand, within SM_b20094 at 101.907 kb on + strand, within SM_b20094 at 102.140 kb on + strand, within SM_b20094 at 102.140 kb on + strand, within SM_b20094 at 102.155 kb on + strand, within SM_b20094 at 102.155 kb on + strand, within SM_b20094 at 102.155 kb on + strand, within SM_b20094 at 102.156 kb on - strand, within SM_b20094 at 102.156 kb on - strand, within SM_b20094 at 102.339 kb on + strand, within SM_b20094 at 102.787 kb on + strand, within SM_b20094 at 102.834 kb on + strand, within SM_b20094 at 102.835 kb on - strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.851 kb on + strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.852 kb on - strand, within SM_b20094 at 102.929 kb on - strand, within SM_b20094 at 103.001 kb on - strand, within SM_b20094 at 103.007 kb on + strand at 103.007 kb on + strand at 103.141 kb on + strand at 103.141 kb on + strand at 103.141 kb on + strand at 103.142 kb on - strand at 103.142 kb on - strand at 103.207 kb on - strand at 103.207 kb on - strand at 103.207 kb on - strand at 103.463 kb on - strand, within SM_b20095 at 103.513 kb on + strand, within SM_b20095 at 103.514 kb on - strand, within SM_b20095 at 103.585 kb on + strand, within SM_b20095 at 103.982 kb on + strand, within SM_b20095 at 104.056 kb on + strand, within SM_b20095 at 104.058 kb on + strand, within SM_b20095 at 104.065 kb on + strand, within SM_b20095 at 104.065 kb on + strand, within SM_b20095 at 104.065 kb on + strand, within SM_b20095
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 100,487 + -0.5 100,641 - -0.5 100,661 - +0.2 100,742 + SM_b20093 0.18 -1.1 100,742 + SM_b20093 0.18 +0.1 100,743 - SM_b20093 0.18 +0.4 101,094 - SM_b20093 0.55 -0.1 101,282 + SM_b20093 0.75 +0.3 101,282 + SM_b20093 0.75 -0.1 101,283 - SM_b20093 0.75 -0.3 101,283 - SM_b20093 0.75 +1.0 101,283 - SM_b20093 0.75 -1.3 101,411 + +0.7 101,641 + SM_b20094 0.13 -1.3 101,907 + SM_b20094 0.28 +0.2 102,140 + SM_b20094 0.41 -0.8 102,140 + SM_b20094 0.41 -0.0 102,155 + SM_b20094 0.42 +1.3 102,155 + SM_b20094 0.42 +0.2 102,155 + SM_b20094 0.42 -0.6 102,156 - SM_b20094 0.42 -0.7 102,156 - SM_b20094 0.42 +0.5 102,339 + SM_b20094 0.52 +1.0 102,787 + SM_b20094 0.78 -1.7 102,834 + SM_b20094 0.80 -2.2 102,835 - SM_b20094 0.80 +0.3 102,851 + SM_b20094 0.81 -0.1 102,851 + SM_b20094 0.81 -0.7 102,851 + SM_b20094 0.81 +1.5 102,851 + SM_b20094 0.81 -0.7 102,851 + SM_b20094 0.81 +0.2 102,851 + SM_b20094 0.81 -0.2 102,851 + SM_b20094 0.81 -0.5 102,851 + SM_b20094 0.81 +0.4 102,852 - SM_b20094 0.81 -1.3 102,852 - SM_b20094 0.81 -1.5 102,852 - SM_b20094 0.81 -0.8 102,852 - SM_b20094 0.81 -2.4 102,852 - SM_b20094 0.81 -1.9 102,852 - SM_b20094 0.81 -0.8 102,852 - SM_b20094 0.81 -0.4 102,852 - SM_b20094 0.81 +0.8 102,852 - SM_b20094 0.81 -0.9 102,929 - SM_b20094 0.86 +0.2 103,001 - SM_b20094 0.90 +0.0 103,007 + -0.9 103,007 + -0.6 103,141 + -0.0 103,141 + +0.2 103,141 + -1.3 103,142 - +0.1 103,142 - +1.2 103,207 - -0.5 103,207 - -0.2 103,207 - -1.9 103,463 - SM_b20095 0.14 -2.3 103,513 + SM_b20095 0.17 -0.9 103,514 - SM_b20095 0.17 -0.8 103,585 + SM_b20095 0.21 +0.7 103,982 + SM_b20095 0.43 +0.6 104,056 + SM_b20095 0.47 -2.1 104,058 + SM_b20095 0.47 -0.7 104,065 + SM_b20095 0.47 -0.1 104,065 + SM_b20095 0.47 -0.3 104,065 + SM_b20095 0.47 -0.3
Or see this region's nucleotide sequence