Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20011 and SM_b20012 are separated by 31 nucleotides SM_b20012 and SM_b20013 are separated by 55 nucleotides
SM_b20011: SM_b20011 - hypothetical protein, at 15,669 to 16,448
_b20011
SM_b20012: SM_b20012 - hypothetical protein, at 16,480 to 19,023
_b20012
SM_b20013: SM_b20013 - hypothetical protein, at 19,079 to 20,323
_b20013
Position (kb) 16
17
18
19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 15.675 kb on - strand at 15.906 kb on + strand, within SM_b20011 at 15.907 kb on - strand, within SM_b20011 at 15.907 kb on - strand, within SM_b20011 at 15.908 kb on + strand, within SM_b20011 at 15.908 kb on + strand, within SM_b20011 at 15.909 kb on - strand, within SM_b20011 at 16.301 kb on + strand, within SM_b20011 at 16.508 kb on + strand at 16.957 kb on + strand, within SM_b20012 at 16.957 kb on + strand, within SM_b20012 at 16.958 kb on - strand, within SM_b20012 at 16.970 kb on + strand, within SM_b20012 at 17.004 kb on - strand, within SM_b20012 at 17.204 kb on + strand, within SM_b20012 at 17.205 kb on - strand, within SM_b20012 at 17.432 kb on + strand, within SM_b20012 at 17.433 kb on - strand, within SM_b20012 at 17.433 kb on - strand, within SM_b20012 at 17.483 kb on - strand, within SM_b20012 at 17.483 kb on - strand, within SM_b20012 at 17.505 kb on + strand, within SM_b20012 at 17.648 kb on + strand, within SM_b20012 at 17.649 kb on - strand, within SM_b20012 at 17.722 kb on + strand, within SM_b20012 at 17.723 kb on - strand, within SM_b20012 at 18.049 kb on + strand, within SM_b20012 at 18.049 kb on + strand, within SM_b20012 at 18.049 kb on + strand, within SM_b20012 at 18.050 kb on - strand, within SM_b20012 at 18.050 kb on - strand, within SM_b20012 at 18.141 kb on + strand, within SM_b20012 at 18.272 kb on + strand, within SM_b20012 at 18.273 kb on - strand, within SM_b20012 at 18.273 kb on - strand, within SM_b20012 at 18.380 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.663 kb on - strand, within SM_b20012 at 18.663 kb on - strand, within SM_b20012 at 18.737 kb on + strand, within SM_b20012 at 18.737 kb on + strand, within SM_b20012 at 18.738 kb on - strand, within SM_b20012 at 18.770 kb on + strand at 19.081 kb on - strand at 19.081 kb on - strand at 19.110 kb on + strand at 19.111 kb on - strand at 19.111 kb on - strand at 19.226 kb on + strand, within SM_b20013 at 19.227 kb on - strand, within SM_b20013 at 19.270 kb on + strand, within SM_b20013 at 19.271 kb on - strand, within SM_b20013 at 19.272 kb on + strand, within SM_b20013 at 19.382 kb on + strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.423 kb on - strand, within SM_b20013 at 19.423 kb on - strand, within SM_b20013 at 19.470 kb on + strand, within SM_b20013 at 19.471 kb on - strand, within SM_b20013 at 19.569 kb on + strand, within SM_b20013 at 19.612 kb on - strand, within SM_b20013 at 19.911 kb on + strand, within SM_b20013 at 19.912 kb on - strand, within SM_b20013
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 15,675 - -1.5 15,906 + SM_b20011 0.30 +0.3 15,907 - SM_b20011 0.31 -2.6 15,907 - SM_b20011 0.31 +0.0 15,908 + SM_b20011 0.31 -0.6 15,908 + SM_b20011 0.31 -1.4 15,909 - SM_b20011 0.31 -1.9 16,301 + SM_b20011 0.81 -3.0 16,508 + -1.5 16,957 + SM_b20012 0.19 +1.2 16,957 + SM_b20012 0.19 -0.4 16,958 - SM_b20012 0.19 +1.5 16,970 + SM_b20012 0.19 +0.2 17,004 - SM_b20012 0.21 -0.8 17,204 + SM_b20012 0.28 -0.6 17,205 - SM_b20012 0.28 -0.1 17,432 + SM_b20012 0.37 -1.8 17,433 - SM_b20012 0.37 -0.5 17,433 - SM_b20012 0.37 +0.1 17,483 - SM_b20012 0.39 -0.3 17,483 - SM_b20012 0.39 +0.0 17,505 + SM_b20012 0.40 -0.9 17,648 + SM_b20012 0.46 -0.4 17,649 - SM_b20012 0.46 -0.0 17,722 + SM_b20012 0.49 -1.8 17,723 - SM_b20012 0.49 -1.8 18,049 + SM_b20012 0.62 +0.7 18,049 + SM_b20012 0.62 -2.2 18,049 + SM_b20012 0.62 -0.4 18,050 - SM_b20012 0.62 -1.7 18,050 - SM_b20012 0.62 +0.2 18,141 + SM_b20012 0.65 -0.6 18,272 + SM_b20012 0.70 -0.6 18,273 - SM_b20012 0.70 -0.1 18,273 - SM_b20012 0.70 +1.9 18,380 + SM_b20012 0.75 -0.2 18,662 + SM_b20012 0.86 -0.1 18,662 + SM_b20012 0.86 -0.8 18,662 + SM_b20012 0.86 -1.9 18,662 + SM_b20012 0.86 +3.4 18,663 - SM_b20012 0.86 -0.4 18,663 - SM_b20012 0.86 +0.6 18,737 + SM_b20012 0.89 +0.7 18,737 + SM_b20012 0.89 -1.1 18,738 - SM_b20012 0.89 +0.5 18,770 + +0.4 19,081 - -1.8 19,081 - -3.2 19,110 + +0.3 19,111 - +0.6 19,111 - +0.1 19,226 + SM_b20013 0.12 +3.0 19,227 - SM_b20013 0.12 -1.5 19,270 + SM_b20013 0.15 -2.3 19,271 - SM_b20013 0.15 -0.4 19,272 + SM_b20013 0.16 +0.2 19,382 + SM_b20013 0.24 +0.3 19,383 - SM_b20013 0.24 +0.7 19,383 - SM_b20013 0.24 +0.3 19,383 - SM_b20013 0.24 +0.9 19,383 - SM_b20013 0.24 -2.3 19,423 - SM_b20013 0.28 +0.2 19,423 - SM_b20013 0.28 -0.2 19,470 + SM_b20013 0.31 -0.6 19,471 - SM_b20013 0.31 -0.1 19,569 + SM_b20013 0.39 -0.0 19,612 - SM_b20013 0.43 -0.7 19,911 + SM_b20013 0.67 +0.1 19,912 - SM_b20013 0.67 -2.2
Or see this region's nucleotide sequence