Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20011
Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.0025 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 14,676 | - | SM_b20010 | 0.28 | -0.3 | |
| 14,734 | + | SM_b20010 | 0.34 | +0.5 | |
| 14,735 | - | SM_b20010 | 0.34 | +1.2 | |
| 15,441 | - | -0.3 | |||
| 15,470 | + | +0.9 | |||
| 15,470 | + | -0.8 | |||
| 15,470 | + | +0.7 | |||
| 15,675 | - | -1.5 | |||
| 15,906 | + | SM_b20011 | 0.30 | +0.3 | |
| 15,907 | - | SM_b20011 | 0.31 | -2.6 | |
| 15,907 | - | SM_b20011 | 0.31 | +0.0 | |
| 15,908 | + | SM_b20011 | 0.31 | -0.6 | |
| 15,908 | + | SM_b20011 | 0.31 | -1.4 | |
| 15,909 | - | SM_b20011 | 0.31 | -1.9 | |
| 16,301 | + | SM_b20011 | 0.81 | -3.0 | |
| 16,508 | + | -1.5 | |||
| 16,957 | + | SM_b20012 | 0.19 | +1.2 | |
| 16,957 | + | SM_b20012 | 0.19 | -0.4 | |
| 16,958 | - | SM_b20012 | 0.19 | +1.5 | |
| 16,970 | + | SM_b20012 | 0.19 | +0.2 | |
| 17,004 | - | SM_b20012 | 0.21 | -0.8 | |
| 17,204 | + | SM_b20012 | 0.28 | -0.6 | |
| 17,205 | - | SM_b20012 | 0.28 | -0.1 | |
| 17,432 | + | SM_b20012 | 0.37 | -1.8 | |
| 17,433 | - | SM_b20012 | 0.37 | -0.5 | |
| 17,433 | - | SM_b20012 | 0.37 | +0.1 |
Or see this region's nucleotide sequence