Experiment: Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20008 and SM_b20009 overlap by 14 nucleotides SM_b20009 and SM_b20010 are separated by 94 nucleotides
SM_b20008: SM_b20008 - ATP-dependent DNA ligase, at 12,297 to 13,364
_b20008
SM_b20009: SM_b20009 - transcriptional regulator, at 13,351 to 14,280
_b20009
SM_b20010: SM_b20010 - hypothetical protein, at 14,375 to 15,442
_b20010
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1 at 12.444 kb on + strand, within SM_b20008 at 12.445 kb on - strand, within SM_b20008 at 12.445 kb on - strand, within SM_b20008 at 12.503 kb on + strand, within SM_b20008 at 12.503 kb on + strand, within SM_b20008 at 12.505 kb on + strand, within SM_b20008 at 12.505 kb on + strand, within SM_b20008 at 12.931 kb on + strand, within SM_b20008 at 12.932 kb on - strand, within SM_b20008 at 12.933 kb on + strand, within SM_b20008 at 12.933 kb on + strand, within SM_b20008 at 12.934 kb on - strand, within SM_b20008 at 13.088 kb on + strand, within SM_b20008 at 13.268 kb on + strand at 13.337 kb on + strand at 13.337 kb on + strand at 13.337 kb on + strand at 13.337 kb on + strand at 13.337 kb on + strand at 13.337 kb on + strand at 13.338 kb on - strand at 13.338 kb on - strand at 13.338 kb on - strand at 13.338 kb on - strand at 13.341 kb on + strand at 13.341 kb on + strand at 13.342 kb on - strand at 13.342 kb on - strand at 13.399 kb on - strand at 13.551 kb on + strand, within SM_b20009 at 13.551 kb on + strand, within SM_b20009 at 13.552 kb on - strand, within SM_b20009 at 13.561 kb on + strand, within SM_b20009 at 13.846 kb on + strand, within SM_b20009 at 13.847 kb on - strand, within SM_b20009 at 13.847 kb on - strand, within SM_b20009 at 13.973 kb on + strand, within SM_b20009 at 14.229 kb on + strand at 14.230 kb on - strand at 14.230 kb on - strand at 14.263 kb on + strand at 14.264 kb on - strand at 14.264 kb on - strand at 14.340 kb on + strand at 14.369 kb on - strand at 14.655 kb on - strand, within SM_b20010 at 14.676 kb on - strand, within SM_b20010 at 14.734 kb on + strand, within SM_b20010 at 14.735 kb on - strand, within SM_b20010
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0025 mg/ml remove 12,444 + SM_b20008 0.14 -0.8 12,445 - SM_b20008 0.14 -0.1 12,445 - SM_b20008 0.14 -2.1 12,503 + SM_b20008 0.19 -0.3 12,503 + SM_b20008 0.19 +0.1 12,505 + SM_b20008 0.19 -0.2 12,505 + SM_b20008 0.19 +1.2 12,931 + SM_b20008 0.59 -2.6 12,932 - SM_b20008 0.59 +0.6 12,933 + SM_b20008 0.60 -0.3 12,933 + SM_b20008 0.60 +1.1 12,934 - SM_b20008 0.60 -0.3 13,088 + SM_b20008 0.74 +1.2 13,268 + -0.7 13,337 + -1.7 13,337 + -0.2 13,337 + -0.6 13,337 + -1.6 13,337 + +0.0 13,337 + +0.2 13,338 - -0.2 13,338 - +0.5 13,338 - -0.6 13,338 - +0.6 13,341 + -0.3 13,341 + -0.1 13,342 - -0.5 13,342 - -2.3 13,399 - +0.8 13,551 + SM_b20009 0.22 -1.8 13,551 + SM_b20009 0.22 -1.1 13,552 - SM_b20009 0.22 -0.1 13,561 + SM_b20009 0.23 -2.2 13,846 + SM_b20009 0.53 -0.0 13,847 - SM_b20009 0.53 +0.5 13,847 - SM_b20009 0.53 -2.1 13,973 + SM_b20009 0.67 -0.3 14,229 + +1.0 14,230 - -0.4 14,230 - -1.2 14,263 + +0.0 14,264 - -1.0 14,264 - -0.9 14,340 + -1.1 14,369 - +0.0 14,655 - SM_b20010 0.26 -0.5 14,676 - SM_b20010 0.28 -0.3 14,734 + SM_b20010 0.34 +0.5 14,735 - SM_b20010 0.34 +1.2
Or see this region's nucleotide sequence