Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3419

Experiment: nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 100 mM
3,806,983	+				+0.4
3,806,984	-				-1.5
3,806,984	-				-0.2
3,806,984	-				-0.1
3,806,999	+				-1.0
3,807,000	-				-0.1
3,807,026	+				-0.7
3,807,026	+				-0.3
3,807,027	-				+1.0
3,807,027	-				+1.6
3,807,027	-				+1.0
3,807,085	+				+0.4
3,807,085	+				-0.3
3,807,097	+				-0.6
3,807,098	-				-0.6
3,807,098	-				-0.6
3,807,189	+				-0.6
3,807,307	+				+2.6
3,807,308	-				+0.4
3,807,749	-				-0.0
3,807,894	+				+1.2
3,807,894	+				-1.8
3,807,894	+				-0.0
3,807,903	+				+0.1
3,807,903	+				-0.2
3,807,903	+				-0.6
3,807,903	+				+0.4
3,807,904	-				-1.2
3,807,904	-				-0.8
3,807,987	+				-0.4
3,808,065	+				-0.0
3,808,103	+				+0.6
3,808,104	-				+0.2
3,808,197	+		Pf1N1B4_3419	0.14	-0.2
3,808,335	+		Pf1N1B4_3419	0.20	-1.4
3,808,335	+		Pf1N1B4_3419	0.20	-0.2
3,808,335	+				-0.6
3,808,335	+		Pf1N1B4_3419	0.20	-0.4
3,808,335	+		Pf1N1B4_3419	0.20	+0.5
3,808,335	+		Pf1N1B4_3419	0.20	-0.2
3,808,336	-		Pf1N1B4_3419	0.20	-0.2
3,808,336	-		Pf1N1B4_3419	0.20	-0.5
3,808,336	-		Pf1N1B4_3419	0.20	-0.6
3,808,336	-		Pf1N1B4_3419	0.20	+1.0
3,808,336	-		Pf1N1B4_3419	0.20	+0.4
3,808,394	+		Pf1N1B4_3419	0.22	-0.4
3,808,395	-		Pf1N1B4_3419	0.22	+0.4
3,808,496	+		Pf1N1B4_3419	0.27	-1.1
3,808,496	+		Pf1N1B4_3419	0.27	-1.3
3,808,496	+		Pf1N1B4_3419	0.27	-0.2
3,808,496	+		Pf1N1B4_3419	0.27	+1.0
3,808,497	-		Pf1N1B4_3419	0.27	-0.5
3,808,497	-		Pf1N1B4_3419	0.27	+0.4
3,808,523	+		Pf1N1B4_3419	0.28	-0.6
3,808,523	+		Pf1N1B4_3419	0.28	-0.0
3,808,565	+		Pf1N1B4_3419	0.30	-0.8
3,808,577	+		Pf1N1B4_3419	0.30	-0.2
3,808,633	-		Pf1N1B4_3419	0.33	-0.0
3,808,807	+		Pf1N1B4_3419	0.40	+1.0
3,808,829	+		Pf1N1B4_3419	0.41	-0.6
3,808,830	-		Pf1N1B4_3419	0.41	-0.0
3,808,843	-		Pf1N1B4_3419	0.42	-0.5
3,808,843	-		Pf1N1B4_3419	0.42	-0.6
3,808,919	+		Pf1N1B4_3419	0.45	-0.3
3,808,919	+		Pf1N1B4_3419	0.45	-0.6
3,808,920	-		Pf1N1B4_3419	0.45	-1.8
3,809,028	+		Pf1N1B4_3419	0.50	-0.9
3,809,028	+		Pf1N1B4_3419	0.50	-1.8
3,809,106	+		Pf1N1B4_3419	0.53	+1.4
3,809,107	-				-0.0
3,809,107	-		Pf1N1B4_3419	0.53	-0.0
3,809,187	-		Pf1N1B4_3419	0.57	-2.6
3,809,228	+		Pf1N1B4_3419	0.59	-0.2
3,809,228	+		Pf1N1B4_3419	0.59	+0.6
3,809,228	+		Pf1N1B4_3419	0.59	-0.2
3,809,228	+		Pf1N1B4_3419	0.59	+0.5
3,809,228	+		Pf1N1B4_3419	0.59	-1.3
3,809,229	-		Pf1N1B4_3419	0.59	-1.3
3,809,229	-		Pf1N1B4_3419	0.59	-1.8
3,809,229	-		Pf1N1B4_3419	0.59	-0.3
3,809,270	-		Pf1N1B4_3419	0.60	-0.8
3,809,273	+		Pf1N1B4_3419	0.61	-0.0
3,809,385	+		Pf1N1B4_3419	0.65	-1.2
3,809,573	+		Pf1N1B4_3419	0.74	+0.4
3,809,574	-		Pf1N1B4_3419	0.74	-0.3
3,809,574	-		Pf1N1B4_3419	0.74	-0.0
3,809,625	-		Pf1N1B4_3419	0.76	+1.0
3,809,644	-				-1.0
3,809,684	+		Pf1N1B4_3419	0.79	+0.2
3,809,684	+				-0.0
3,809,684	+		Pf1N1B4_3419	0.79	-1.3
3,809,684	+		Pf1N1B4_3419	0.79	+1.0
3,809,684	+		Pf1N1B4_3419	0.79	-1.2
3,809,684	+		Pf1N1B4_3419	0.79	-0.0
3,809,685	-		Pf1N1B4_3419	0.79	-0.0
3,809,685	-		Pf1N1B4_3419	0.79	+0.7
3,809,685	-		Pf1N1B4_3419	0.79	-2.0
3,809,687	+		Pf1N1B4_3419	0.79	+0.4
3,809,714	+		Pf1N1B4_3419	0.80	-0.0
3,809,715	-		Pf1N1B4_3419	0.80	+0.3
3,809,718	+		Pf1N1B4_3419	0.80	-1.1
3,809,718	+		Pf1N1B4_3419	0.80	+0.9
3,809,718	+				-0.6
3,809,719	-		Pf1N1B4_3419	0.80	-0.7
3,809,719	-		Pf1N1B4_3419	0.80	+0.2
3,809,719	-		Pf1N1B4_3419	0.80	+1.0
3,809,738	+		Pf1N1B4_3419	0.81	-0.5
3,809,738	+		Pf1N1B4_3419	0.81	+0.2
3,809,738	+		Pf1N1B4_3419	0.81	+0.2
3,809,738	+		Pf1N1B4_3419	0.81	-0.0
3,809,739	-		Pf1N1B4_3419	0.81	-1.6
3,809,751	-		Pf1N1B4_3419	0.81	+0.2
3,809,801	+		Pf1N1B4_3419	0.84	-2.2
3,809,802	-		Pf1N1B4_3419	0.84	-2.2
3,809,802	-		Pf1N1B4_3419	0.84	-0.4
3,809,802	-		Pf1N1B4_3419	0.84	-1.8
3,809,925	+		Pf1N1B4_3419	0.89	-0.3
3,809,925	+		Pf1N1B4_3419	0.89	-0.0
3,809,925	+		Pf1N1B4_3419	0.89	-1.0
3,809,925	+		Pf1N1B4_3419	0.89	-1.6
3,809,925	+		Pf1N1B4_3419	0.89	-0.3
3,809,926	-		Pf1N1B4_3419	0.89	+0.4
3,809,926	-		Pf1N1B4_3419	0.89	+0.1
3,809,926	-		Pf1N1B4_3419	0.89	+1.0
3,809,927	+		Pf1N1B4_3419	0.89	+0.4
3,809,927	+		Pf1N1B4_3419	0.89	-1.3
3,809,927	+		Pf1N1B4_3419	0.89	-0.2
3,809,927	+		Pf1N1B4_3419	0.89	-2.3
3,809,927	+				+1.0
3,809,927	+		Pf1N1B4_3419	0.89	-1.6
3,809,927	+		Pf1N1B4_3419	0.89	-0.2
3,809,927	+		Pf1N1B4_3419	0.89	-2.0
3,809,927	+		Pf1N1B4_3419	0.89	-2.3
3,809,927	+		Pf1N1B4_3419	0.89	-1.0
3,809,927	+		Pf1N1B4_3419	0.89	+0.8
3,809,927	+		Pf1N1B4_3419	0.89	+0.3
3,809,928	-		Pf1N1B4_3419	0.89	-1.3
3,809,928	-		Pf1N1B4_3419	0.89	+0.6
3,809,928	-				+1.0
3,809,928	-				+2.0
3,809,928	-		Pf1N1B4_3419	0.89	-1.0
3,809,928	-		Pf1N1B4_3419	0.89	+2.4
3,809,928	-		Pf1N1B4_3419	0.89	+0.8
3,809,928	-		Pf1N1B4_3419	0.89	-1.6
3,809,928	-		Pf1N1B4_3419	0.89	-1.7
3,809,929	+		Pf1N1B4_3419	0.89	+0.1
3,809,929	+		Pf1N1B4_3419	0.89	-1.2
3,809,929	+		Pf1N1B4_3419	0.89	-1.2
3,809,930	-		Pf1N1B4_3419	0.89	-1.0
3,809,930	-		Pf1N1B4_3419	0.89	+1.4
3,810,058	+				+0.3
3,810,195	-				+1.8
3,810,243	-				-1.8
3,810,308	-				+1.3
3,810,308	-				-1.0
3,810,308	-				+0.7
3,810,522	-		Pf1N1B4_3420	0.28	+0.6
3,810,534	-		Pf1N1B4_3420	0.30	+2.0
3,810,564	+		Pf1N1B4_3420	0.34	+0.3
3,810,565	-		Pf1N1B4_3420	0.34	-1.3
3,810,657	-		Pf1N1B4_3420	0.46	+1.6
3,810,715	+		Pf1N1B4_3420	0.53	+1.2
3,810,820	+		Pf1N1B4_3420	0.67	-1.6
3,810,820	+		Pf1N1B4_3420	0.67	-1.0
3,810,820	+		Pf1N1B4_3420	0.67	+2.0
3,810,821	-		Pf1N1B4_3420	0.67	+1.7
3,810,821	-		Pf1N1B4_3420	0.67	+1.0
3,810,821	-		Pf1N1B4_3420	0.67	+1.2
3,810,821	-		Pf1N1B4_3420	0.67	-0.3
3,810,821	-		Pf1N1B4_3420	0.67	+0.2
3,810,923	+		Pf1N1B4_3420	0.80	+1.8
3,810,924	-		Pf1N1B4_3420	0.80	+0.2
3,810,953	-		Pf1N1B4_3420	0.84	+0.6
3,810,953	-		Pf1N1B4_3420	0.84	-1.3
3,811,142	+				+1.0
3,811,143	-				-0.0
3,811,151	+				-1.3
3,811,152	-				-0.3
3,811,156	+				-0.6
3,811,157	-				-0.8