Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2668

Experiment: nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 100 mM
3,003,937	-				+1.6
3,003,937	-				+0.8
3,003,937	-				+0.5
3,003,937	-				+0.1
3,003,937	-				+1.3
3,003,943	-				+1.3
3,003,943	-				+0.4
3,003,943	-				-0.3
3,003,943	-				+1.6
3,003,943	-				+1.6
3,003,943	-				+0.7
3,003,943	-				-1.9
3,003,943	-				+0.7
3,003,943	-				+0.0
3,003,943	-				-0.7
3,003,943	-				+0.9
3,003,943	-				-0.3
3,003,943	-				+1.7
3,003,943	-				+4.1
3,003,943	-				+1.3
3,003,977	+				+1.3
3,003,977	+				+2.2
3,003,977	+				+1.0
3,003,978	-				-1.7
3,003,984	+				+1.1
3,003,985	-				-0.3
3,003,985	-				-0.7
3,003,999	+				+0.6
3,003,999	+				-0.7
3,004,000	-				+0.5
3,004,000	-				-0.3
3,004,000	-				+2.8
3,004,053	+				-1.0
3,004,074	+		Pf1N1B4_2667	0.11	+0.5
3,004,074	+		Pf1N1B4_2667	0.11	+0.3
3,004,074	+		Pf1N1B4_2667	0.11	+0.3
3,004,074	+		Pf1N1B4_2667	0.11	-0.7
3,004,074	+		Pf1N1B4_2667	0.11	-0.1
3,004,074	+		Pf1N1B4_2667	0.11	+0.3
3,004,074	+		Pf1N1B4_2667	0.11	+1.6
3,004,074	+		Pf1N1B4_2667	0.11	+0.5
3,004,075	-		Pf1N1B4_2667	0.11	+1.3
3,004,075	-		Pf1N1B4_2667	0.11	+2.6
3,004,075	-		Pf1N1B4_2667	0.11	-0.7
3,004,075	-		Pf1N1B4_2667	0.11	+0.4
3,004,122	+		Pf1N1B4_2667	0.17	+0.3
3,004,123	-		Pf1N1B4_2667	0.17	-0.4
3,004,123	-		Pf1N1B4_2667	0.17	-0.3
3,004,123	-		Pf1N1B4_2667	0.17	+0.0
3,004,227	+		Pf1N1B4_2667	0.30	-1.3
3,004,227	+		Pf1N1B4_2667	0.30	+1.8
3,004,228	-		Pf1N1B4_2667	0.30	-3.4
3,004,228	-		Pf1N1B4_2667	0.30	+0.3
3,004,228	-		Pf1N1B4_2667	0.30	-0.2
3,004,337	+		Pf1N1B4_2667	0.44	+0.6
3,004,350	+		Pf1N1B4_2667	0.45	-0.9
3,004,350	+		Pf1N1B4_2667	0.45	-0.3
3,004,350	+		Pf1N1B4_2667	0.45	+0.5
3,004,350	+		Pf1N1B4_2667	0.45	-1.6
3,004,351	-		Pf1N1B4_2667	0.45	+1.3
3,004,607	+		Pf1N1B4_2667	0.77	-0.3
3,004,608	-		Pf1N1B4_2667	0.77	-0.3
3,004,608	-		Pf1N1B4_2667	0.77	+0.3
3,004,633	+		Pf1N1B4_2667	0.80	-1.1
3,004,633	+		Pf1N1B4_2667	0.80	+0.8
3,004,633	+		Pf1N1B4_2667	0.80	-0.4
3,004,633	+		Pf1N1B4_2667	0.80	+0.2
3,004,649	+		Pf1N1B4_2667	0.82	-1.5
3,004,649	+		Pf1N1B4_2667	0.82	-0.2
3,004,649	+		Pf1N1B4_2667	0.82	-0.8
3,004,649	+		Pf1N1B4_2667	0.82	-0.9
3,004,650	-		Pf1N1B4_2667	0.82	+0.3
3,004,895	+		Pf1N1B4_2668	0.17	-0.1
3,004,895	+		Pf1N1B4_2668	0.17	+0.1
3,004,928	+		Pf1N1B4_2668	0.23	+0.3
3,004,928	+		Pf1N1B4_2668	0.23	+1.3
3,004,928	+		Pf1N1B4_2668	0.23	+1.3
3,004,928	+		Pf1N1B4_2668	0.23	-0.3
3,004,928	+		Pf1N1B4_2668	0.23	-1.1
3,004,929	-		Pf1N1B4_2668	0.23	+0.8
3,004,929	-		Pf1N1B4_2668	0.23	-0.9
3,004,944	+		Pf1N1B4_2668	0.25	-1.1
3,004,944	+		Pf1N1B4_2668	0.25	+0.1
3,004,944	+		Pf1N1B4_2668	0.25	-1.5
3,005,109	+		Pf1N1B4_2668	0.55	-1.6
3,005,109	+		Pf1N1B4_2668	0.55	-0.9
3,005,109	+		Pf1N1B4_2668	0.55	-1.5
3,005,110	-		Pf1N1B4_2668	0.55	+1.3
3,005,110	-		Pf1N1B4_2668	0.55	-0.3
3,005,110	-		Pf1N1B4_2668	0.55	-1.0
3,005,133	+		Pf1N1B4_2668	0.59	-0.3
3,005,133	+		Pf1N1B4_2668	0.59	-1.3
3,005,133	+		Pf1N1B4_2668	0.59	-1.6
3,005,147	+		Pf1N1B4_2668	0.62	-1.9
3,005,148	-		Pf1N1B4_2668	0.62	-0.3
3,005,198	+		Pf1N1B4_2668	0.71	+0.3
3,005,198	+				+1.3
3,005,198	+		Pf1N1B4_2668	0.71	-0.7
3,005,198	+		Pf1N1B4_2668	0.71	-0.3
3,005,198	+		Pf1N1B4_2668	0.71	-0.7
3,005,198	+		Pf1N1B4_2668	0.71	-0.2
3,005,198	+		Pf1N1B4_2668	0.71	-0.3
3,005,198	+		Pf1N1B4_2668	0.71	+0.0
3,005,199	-		Pf1N1B4_2668	0.71	+0.0
3,005,199	-		Pf1N1B4_2668	0.71	-0.7
3,005,199	-		Pf1N1B4_2668	0.71	-0.7
3,005,199	-		Pf1N1B4_2668	0.71	-0.7
3,005,199	-		Pf1N1B4_2668	0.71	-1.9
3,005,202	+		Pf1N1B4_2668	0.72	+0.1
3,005,202	+		Pf1N1B4_2668	0.72	-2.6
3,005,202	+		Pf1N1B4_2668	0.72	-1.3
3,005,202	+		Pf1N1B4_2668	0.72	-1.3
3,005,202	+		Pf1N1B4_2668	0.72	-1.1
3,005,202	+		Pf1N1B4_2668	0.72	-1.7
3,005,202	+		Pf1N1B4_2668	0.72	-0.3
3,005,202	+		Pf1N1B4_2668	0.72	-0.1
3,005,202	+		Pf1N1B4_2668	0.72	-1.2
3,005,202	+		Pf1N1B4_2668	0.72	-1.3
3,005,202	+		Pf1N1B4_2668	0.72	-1.3
3,005,202	+		Pf1N1B4_2668	0.72	-1.2
3,005,202	+		Pf1N1B4_2668	0.72	-0.7
3,005,202	+		Pf1N1B4_2668	0.72	-1.3
3,005,202	+		Pf1N1B4_2668	0.72	+0.1
3,005,202	+		Pf1N1B4_2668	0.72	-2.1
3,005,202	+		Pf1N1B4_2668	0.72	-2.4
3,005,202	+		Pf1N1B4_2668	0.72	-1.7
3,005,202	+		Pf1N1B4_2668	0.72	-0.7
3,005,202	+		Pf1N1B4_2668	0.72	-1.4
3,005,202	+		Pf1N1B4_2668	0.72	-1.5
3,005,202	+		Pf1N1B4_2668	0.72	-0.7
3,005,202	+		Pf1N1B4_2668	0.72	-1.7
3,005,202	+		Pf1N1B4_2668	0.72	-0.1
3,005,202	+		Pf1N1B4_2668	0.72	-0.3
3,005,203	-		Pf1N1B4_2668	0.72	-0.6
3,005,203	-		Pf1N1B4_2668	0.72	-1.9
3,005,203	-		Pf1N1B4_2668	0.72	+1.3
3,005,203	-		Pf1N1B4_2668	0.72	-0.3
3,005,203	-		Pf1N1B4_2668	0.72	-1.2
3,005,203	-		Pf1N1B4_2668	0.72	-0.2
3,005,203	-		Pf1N1B4_2668	0.72	+0.3
3,005,203	-		Pf1N1B4_2668	0.72	+0.5
3,005,203	-		Pf1N1B4_2668	0.72	-0.8
3,005,203	-		Pf1N1B4_2668	0.72	+1.5
3,005,203	-		Pf1N1B4_2668	0.72	-0.3
3,005,203	-		Pf1N1B4_2668	0.72	-1.1
3,005,203	-		Pf1N1B4_2668	0.72	-0.7
3,005,203	-		Pf1N1B4_2668	0.72	-0.2
3,005,203	-		Pf1N1B4_2668	0.72	-0.4
3,005,203	-		Pf1N1B4_2668	0.72	-1.1
3,005,376	+				-0.1
3,005,376	+				-0.7
3,005,376	+				-1.1
3,005,376	+				+0.5
3,005,376	+				-1.7
3,005,376	+				-0.9
3,005,376	+				-1.1
3,005,377	-				-0.5
3,005,377	-				+1.1
3,005,377	-				-1.0
3,005,377	-				-0.7
3,005,377	-				-0.9
3,005,377	-				-1.5
3,005,392	+				+0.3
3,005,396	+				+0.0
3,005,396	+				+0.3
3,005,396	+				+0.5
3,005,396	+				-1.9
3,005,396	+				+0.3
3,005,396	+				+1.6
3,005,396	+				-0.1
3,005,396	+				+1.6
3,005,396	+				-0.3
3,005,396	+				+0.3
3,005,396	+				+0.7
3,005,396	+				-1.3
3,005,396	+				+1.0
3,005,396	+				-0.1
3,005,396	+				-0.9
3,005,397	-				-0.0
3,005,397	-				+0.3
3,005,397	-				-0.2
3,005,397	-				-1.1
3,005,397	-				-1.0
3,005,397	-				-2.1
3,005,397	-				-0.7
3,005,397	-				-1.6
3,005,397	-				-0.5
3,005,397	-				+0.8
3,005,397	-				-1.8
3,005,397	-				-0.2
3,005,397	-				-1.5
3,005,397	-				-0.7
3,005,397	-				+0.3
3,005,397	-				-0.3
3,005,397	-				-2.2
3,005,397	-				+0.3
3,005,397	-				+0.4
3,005,397	-				+0.0
3,005,400	+				-0.3
3,005,400	+				+0.3
3,005,401	-				-0.9
3,005,401	-				-1.9
3,005,401	-				-0.2
3,005,401	-				-1.2
3,005,416	+				-1.0
3,005,435	+				+0.3
3,005,436	-				-0.7
3,005,436	-				-0.7
3,005,515	+				-1.5
3,005,515	+				+0.7
3,005,515	+				-0.9
3,005,516	-				+0.0
3,005,521	+				-1.4
3,005,521	+				-2.1
3,005,521	+				-0.2
3,005,521	+				+0.4
3,005,522	-				+0.9
3,005,522	-				+1.3
3,005,522	-				-0.2
3,005,527	+				+0.5
3,005,527	+				-1.7
3,005,528	-				+0.9
3,005,528	-				+0.7
3,005,528	-				-0.7
3,005,565	+				-0.7
3,005,565	+				+2.3
3,005,565	+				-0.3
3,005,566	-				+1.6
3,005,567	+				+0.8
3,005,567	+				-0.3
3,005,567	+				-0.5
3,005,601	+				+0.3
3,005,601	+				+0.3
3,005,626	+				+0.7
3,005,627	-				+0.7
3,005,799	+				-1.6
3,005,799	+				+0.9
3,005,799	+				+0.1
3,005,799	+				-0.3
3,005,800	-				-0.3
3,005,826	+				-0.1
3,005,826	+				-0.7
3,005,826	+				-1.3
3,005,826	+				+0.5
3,005,826	+				+1.3
3,005,827	-				-0.3
3,005,827	-				-0.3
3,005,827	-				-0.3
3,005,827	-				+0.7
3,005,827	-				+0.1
3,005,868	+		Pf1N1B4_2669	0.15	-0.3
3,005,869	-		Pf1N1B4_2669	0.15	+0.1
3,006,003	+		Pf1N1B4_2669	0.44	-0.1
3,006,003	+		Pf1N1B4_2669	0.44	+0.7
3,006,003	+		Pf1N1B4_2669	0.44	+0.0
3,006,003	+		Pf1N1B4_2669	0.44	+0.2
3,006,003	+		Pf1N1B4_2669	0.44	+0.7
3,006,003	+		Pf1N1B4_2669	0.44	-0.9
3,006,004	-		Pf1N1B4_2669	0.45	-0.2
3,006,004	-		Pf1N1B4_2669	0.45	-0.7
3,006,004	-		Pf1N1B4_2669	0.45	-0.3
3,006,004	-		Pf1N1B4_2669	0.45	-1.7
3,006,004	-		Pf1N1B4_2669	0.45	-1.1
3,006,111	+		Pf1N1B4_2669	0.68	-0.1
3,006,111	+		Pf1N1B4_2669	0.68	+0.3
3,006,111	+		Pf1N1B4_2669	0.68	-1.5
3,006,111	+				-0.1
3,006,111	+		Pf1N1B4_2669	0.68	-0.1
3,006,111	+		Pf1N1B4_2669	0.68	-1.5
3,006,112	-		Pf1N1B4_2669	0.68	+1.3
3,006,112	-		Pf1N1B4_2669	0.68	+0.3
3,006,112	-		Pf1N1B4_2669	0.68	+0.0
3,006,112	-		Pf1N1B4_2669	0.68	-0.3
3,006,112	-		Pf1N1B4_2669	0.68	+0.5
3,006,198	+		Pf1N1B4_2669	0.87	+0.3
3,006,198	+		Pf1N1B4_2669	0.87	-0.6
3,006,198	+		Pf1N1B4_2669	0.87	-2.1
3,006,262	+				+0.3
3,006,262	+				+0.4
3,006,263	-				-1.2
3,006,263	-				+0.5
3,006,263	-				-1.3
3,006,263	-				-1.3
3,006,288	+				-1.7
3,006,288	+				+1.3
3,006,288	+				+1.0
3,006,288	+				-0.7
3,006,288	+				+1.3
3,006,289	-				-0.3
3,006,289	-				+1.0
3,006,289	-				+1.8
3,006,289	-				+0.8
3,006,289	-				+0.5
3,006,289	-				+0.8