Experiment: Control soil assay; outgrowth in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22240 and HSERO_RS22245 are separated by 62 nucleotides HSERO_RS22245 and HSERO_RS22250 are separated by 50 nucleotides
HSERO_RS22240: HSERO_RS22240 - L-rhamnose isomerase (EC 5.3.1.14) <small>(from data)</small>, at 5,086,684 to 5,087,979
_RS22240
HSERO_RS22245: HSERO_RS22245 - 2-pyrone-4,6-dicarboxylate hydrolase, at 5,088,042 to 5,088,971
_RS22245
HSERO_RS22250: HSERO_RS22250 - membrane protein, at 5,089,022 to 5,090,317
_RS22250
Position (kb) 5088
5089 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5087.080 kb on - strand, within HSERO_RS22240 at 5087.080 kb on - strand, within HSERO_RS22240 at 5087.103 kb on - strand, within HSERO_RS22240 at 5087.303 kb on + strand, within HSERO_RS22240 at 5087.336 kb on - strand, within HSERO_RS22240 at 5087.427 kb on + strand, within HSERO_RS22240 at 5087.525 kb on + strand, within HSERO_RS22240 at 5087.563 kb on - strand, within HSERO_RS22240 at 5087.698 kb on + strand, within HSERO_RS22240 at 5087.853 kb on - strand at 5087.904 kb on + strand at 5088.148 kb on + strand, within HSERO_RS22245 at 5088.148 kb on + strand, within HSERO_RS22245 at 5088.193 kb on - strand, within HSERO_RS22245 at 5088.220 kb on + strand, within HSERO_RS22245 at 5088.285 kb on + strand, within HSERO_RS22245 at 5088.347 kb on + strand, within HSERO_RS22245 at 5088.347 kb on + strand, within HSERO_RS22245 at 5088.355 kb on - strand, within HSERO_RS22245 at 5088.355 kb on - strand, within HSERO_RS22245 at 5088.474 kb on - strand, within HSERO_RS22245 at 5088.532 kb on - strand, within HSERO_RS22245 at 5088.534 kb on - strand, within HSERO_RS22245 at 5088.562 kb on - strand, within HSERO_RS22245 at 5088.702 kb on - strand, within HSERO_RS22245 at 5088.771 kb on + strand, within HSERO_RS22245 at 5088.930 kb on + strand at 5089.248 kb on - strand at 5089.253 kb on - strand, within HSERO_RS22250 at 5089.277 kb on + strand, within HSERO_RS22250 at 5089.564 kb on - strand, within HSERO_RS22250 at 5089.662 kb on - strand, within HSERO_RS22250 at 5089.680 kb on - strand, within HSERO_RS22250 at 5089.680 kb on - strand, within HSERO_RS22250
Per-strain Table
Position Strand Gene LocusTag Fraction Control soil assay; outgrowth in LB remove 5,087,080 - HSERO_RS22240 0.31 -0.5 5,087,080 - HSERO_RS22240 0.31 -0.6 5,087,103 - HSERO_RS22240 0.32 +1.1 5,087,303 + HSERO_RS22240 0.48 -0.2 5,087,336 - HSERO_RS22240 0.50 +0.3 5,087,427 + HSERO_RS22240 0.57 +1.3 5,087,525 + HSERO_RS22240 0.65 -0.7 5,087,563 - HSERO_RS22240 0.68 -0.2 5,087,698 + HSERO_RS22240 0.78 +1.4 5,087,853 - -0.1 5,087,904 + -0.3 5,088,148 + HSERO_RS22245 0.11 -0.9 5,088,148 + HSERO_RS22245 0.11 +0.4 5,088,193 - HSERO_RS22245 0.16 -1.2 5,088,220 + HSERO_RS22245 0.19 +1.2 5,088,285 + HSERO_RS22245 0.26 -0.2 5,088,347 + HSERO_RS22245 0.33 -0.3 5,088,347 + HSERO_RS22245 0.33 -1.0 5,088,355 - HSERO_RS22245 0.34 -0.5 5,088,355 - HSERO_RS22245 0.34 -1.2 5,088,474 - HSERO_RS22245 0.46 -2.4 5,088,532 - HSERO_RS22245 0.53 -0.1 5,088,534 - HSERO_RS22245 0.53 +2.4 5,088,562 - HSERO_RS22245 0.56 -0.9 5,088,702 - HSERO_RS22245 0.71 -0.3 5,088,771 + HSERO_RS22245 0.78 -0.9 5,088,930 + -0.9 5,089,248 - +1.8 5,089,253 - HSERO_RS22250 0.18 -0.1 5,089,277 + HSERO_RS22250 0.20 -0.5 5,089,564 - HSERO_RS22250 0.42 -0.5 5,089,662 - HSERO_RS22250 0.49 -0.8 5,089,680 - HSERO_RS22250 0.51 -0.6 5,089,680 - HSERO_RS22250 0.51 -0.9
Or see this region's nucleotide sequence