Strain Fitness in Sinorhizobium meliloti 1021 around SMc04404
Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,610,224 | + | SMc04403 | 0.68 | -0.7 | |
3,610,224 | + | SMc04403 | 0.68 | +0.4 | |
3,610,224 | + | SMc04403 | 0.68 | -0.6 | |
3,610,225 | - | SMc04403 | 0.68 | -0.0 | |
3,610,225 | - | SMc04403 | 0.68 | +1.6 | |
3,610,228 | + | SMc04403 | 0.68 | -0.4 | |
3,610,228 | + | SMc04403 | 0.68 | -0.5 | |
3,610,228 | + | SMc04403 | 0.68 | +0.5 | |
3,610,917 | + | -0.5 | |||
3,610,917 | + | +1.5 | |||
3,611,112 | - | SMc04404 | 0.22 | -0.9 | |
3,611,863 | + | +1.1 | |||
3,611,864 | - | +0.3 | |||
3,611,961 | + | SMc04405 | 0.16 | +1.0 | |
3,612,034 | + | SMc04405 | 0.23 | -0.3 | |
3,612,205 | + | SMc04405 | 0.38 | -3.7 | |
3,612,205 | + | SMc04405 | 0.38 | -0.5 | |
3,612,206 | - | SMc04405 | 0.38 | +0.1 | |
3,612,274 | + | SMc04405 | 0.44 | -0.6 | |
3,612,275 | - | SMc04405 | 0.44 | -0.5 | |
3,612,275 | - | SMc04405 | 0.44 | -1.0 | |
3,612,283 | + | SMc04405 | 0.45 | -1.0 |
Or see this region's nucleotide sequence