Strain Fitness in Sinorhizobium meliloti 1021 around SMc04176

Experiment: Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.001 mg/ml
2,164,385	-				-1.0
2,164,475	+				+0.1
2,164,476	-				-0.0
2,164,476	-				-2.0
2,164,476	-				+0.4
2,164,516	+				+0.8
2,164,517	-				+0.8
2,164,702	+		SMc04175	0.21	+0.3
2,164,702	+				+2.3
2,164,703	-		SMc04175	0.21	+0.5
2,164,939	-		SMc04175	0.58	-0.1
2,165,033	-		SMc04175	0.72	+0.1
2,165,062	+		SMc04175	0.77	-0.3
2,165,099	+		SMc04175	0.83	+0.6
2,165,099	+		SMc04175	0.83	+0.6
2,165,099	+		SMc04175	0.83	-0.2
2,165,099	+		SMc04175	0.83	+0.5
2,165,099	+		SMc04175	0.83	+1.0
2,165,100	-		SMc04175	0.83	+1.4
2,165,123	+		SMc04175	0.86	+1.1
2,165,123	+		SMc04175	0.86	-1.1
2,165,123	+		SMc04175	0.86	+0.2
2,165,144	+		SMc04175	0.90	-0.3
2,165,145	-				-0.1
2,165,145	-				-1.0
2,165,177	-				+0.4
2,165,207	+				-0.6
2,165,208	-				-0.3
2,165,232	+				-0.4
2,165,232	+				-0.8
2,165,233	-				-0.2
2,165,288	-				+0.5
2,165,300	-				-0.5
2,165,437	+				-2.1
2,165,437	+				+0.2
2,165,437	+				+0.1
2,165,437	+				+0.8
2,165,437	+				-1.0
2,165,437	+				+1.9
2,165,438	-				+0.2
2,165,438	-				-0.7
2,165,552	+				+1.4
2,165,552	+				-0.1
2,165,552	+				+1.8
2,165,553	-				+2.1
2,165,553	-				+0.5
2,165,553	-				+0.6
2,165,553	-				-0.1
2,165,553	-				-0.4
2,165,654	+		SMc04176	0.11	-1.0
2,165,655	-		SMc04176	0.11	+0.4
2,165,690	+		SMc04176	0.12	+0.2
2,165,690	+		SMc04176	0.12	-0.1
2,165,856	+		SMc04176	0.19	+2.3
2,165,857	-		SMc04176	0.19	+2.3
2,166,048	+		SMc04176	0.26	-0.8
2,166,048	+		SMc04176	0.26	+2.4
2,166,048	+		SMc04176	0.26	+0.7
2,166,049	-		SMc04176	0.26	-0.3
2,166,049	-		SMc04176	0.26	-0.6
2,166,050	+		SMc04176	0.26	-0.1
2,166,050	+		SMc04176	0.26	+0.2
2,166,051	-		SMc04176	0.27	+1.4
2,166,063	+		SMc04176	0.27	-0.1
2,166,064	-		SMc04176	0.27	-1.4
2,166,067	+		SMc04176	0.27	-0.5
2,166,067	+		SMc04176	0.27	-0.6
2,166,068	-		SMc04176	0.27	-0.3
2,166,068	-		SMc04176	0.27	+0.9
2,166,068	-		SMc04176	0.27	-0.5
2,166,068	-		SMc04176	0.27	+0.3
2,166,068	-		SMc04176	0.27	-0.3
2,166,172	+		SMc04176	0.31	-0.6
2,166,239	+		SMc04176	0.34	+3.7
2,166,240	-		SMc04176	0.34	+0.1
2,166,240	-		SMc04176	0.34	+0.0
2,166,253	+		SMc04176	0.34	-0.6
2,166,253	+		SMc04176	0.34	-0.9
2,166,254	-				+0.7
2,166,254	-		SMc04176	0.34	-3.4
2,166,254	-		SMc04176	0.34	+0.5
2,166,287	-		SMc04176	0.36	+1.1
2,166,320	+		SMc04176	0.37	+0.2
2,166,320	+		SMc04176	0.37	+0.8
2,166,320	+		SMc04176	0.37	-0.0
2,166,320	+		SMc04176	0.37	+0.3
2,166,321	-		SMc04176	0.37	-1.6
2,166,321	-		SMc04176	0.37	-0.5
2,166,321	-		SMc04176	0.37	-0.7
2,166,323	-		SMc04176	0.37	-0.1
2,166,392	+		SMc04176	0.40	-0.4
2,166,392	+		SMc04176	0.40	-0.8
2,166,392	+		SMc04176	0.40	-0.1
2,166,393	-		SMc04176	0.40	-0.1
2,166,393	-		SMc04176	0.40	+0.2
2,166,460	-		SMc04176	0.42	+0.4
2,166,461	+		SMc04176	0.42	-0.1
2,166,461	+		SMc04176	0.42	-0.6
2,166,462	-		SMc04176	0.43	+0.4
2,166,462	-		SMc04176	0.43	+0.4
2,166,462	-		SMc04176	0.43	-0.7
2,166,488	-		SMc04176	0.44	+0.6
2,166,528	-		SMc04176	0.45	-0.1
2,166,528	-		SMc04176	0.45	-0.1
2,166,586	-		SMc04176	0.47	+1.0
2,166,617	+		SMc04176	0.49	-0.8
2,167,287	+		SMc04176	0.75	+1.0
2,167,287	+		SMc04176	0.75	+2.5
2,167,287	+		SMc04176	0.75	-1.6
2,167,287	+		SMc04176	0.75	+1.1
2,167,287	+		SMc04176	0.75	+0.0
2,167,288	-		SMc04176	0.75	+0.7
2,167,288	-		SMc04176	0.75	-0.1
2,167,288	-		SMc04176	0.75	+1.1
2,167,621	-		SMc04176	0.88	+0.7
2,167,942	-				+0.8
2,168,093	+				-0.3
2,168,093	+				-0.4
2,168,093	+				+0.9
2,168,093	+				-0.5
2,168,094	-				-0.5
2,168,114	+				+0.0
2,168,141	+		SMc04177	0.16	+1.6
2,168,145	+		SMc04177	0.17	+0.0
2,168,145	+		SMc04177	0.17	+0.3
2,168,145	+		SMc04177	0.17	+0.7
2,168,145	+		SMc04177	0.17	+0.7
2,168,146	-		SMc04177	0.17	+0.7
2,168,146	-		SMc04177	0.17	-0.6
2,168,146	-		SMc04177	0.17	+1.2
2,168,146	-		SMc04177	0.17	+0.0
2,168,197	+		SMc04177	0.28	+0.6
2,168,197	+		SMc04177	0.28	-0.5
2,168,198	-		SMc04177	0.28	-2.6
2,168,310	-		SMc04177	0.52	-0.6
2,168,448	+		SMc04177	0.82	+0.2
2,168,448	+		SMc04177	0.82	+1.2
2,168,449	-		SMc04177	0.82	-0.2
2,168,449	-		SMc04177	0.82	+0.8
2,168,569	+				-1.1
2,168,570	-				-3.7
2,168,570	-				-0.8
2,168,597	-				-1.6
2,168,693	-		SMc04178	0.17	+1.3
2,168,702	-		SMc04178	0.19	-1.9
2,168,781	-		SMc04178	0.30	+0.6
2,168,782	+		SMc04178	0.30	-0.1
2,168,896	+		SMc04178	0.46	+0.1